FFCP PHASE1:Hg19::chr19:13051088..13051148,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13051088..13051148,- | |||
|coexpression_cluster_id=C1059 | |||
|description=CAGE_peak_at_chr19:13051088..13051148,- | |description=CAGE_peak_at_chr19:13051088..13051148,- | ||
|id=chr19:13051088..13051148,- | |id=chr19:13051088..13051148,- | ||
|ontology_enrichment_celltype=CL:0000548!8.30e-30!679;CL:0000004!8.30e-30!679;CL:0000255!8.30e-30!679;CL:0000012!6.43e-29!682;CL:0000144!3.54e-25!625;CL:0002371!1.12e-24!591;CL:0000003!1.33e-19!722;CL:0000055!2.96e-19!180;CL:0000222!2.31e-15!119;CL:0000183!8.49e-15!59;CL:0000220!2.54e-14!246;CL:0002321!3.04e-14!248;CL:0000680!1.64e-13!57;CL:0000056!1.64e-13!57;CL:0000355!1.64e-13!57;CL:0000393!5.66e-13!60;CL:0000211!5.66e-13!60;CL:0000187!6.71e-13!54;CL:0000192!1.54e-11!42;CL:0000514!1.54e-11!42;CL:0000723!8.14e-11!436;CL:0000048!1.73e-10!430;CL:0000034!3.45e-10!444;CL:0000359!9.12e-09!32;CL:0000063!1.16e-08!578 | |ontology_enrichment_celltype=CL:0000548!8.30e-30!679;CL:0000004!8.30e-30!679;CL:0000255!8.30e-30!679;CL:0000012!6.43e-29!682;CL:0000144!3.54e-25!625;CL:0002371!1.12e-24!591;CL:0000003!1.33e-19!722;CL:0000055!2.96e-19!180;CL:0000222!2.31e-15!119;CL:0000183!8.49e-15!59;CL:0000220!2.54e-14!246;CL:0002321!3.04e-14!248;CL:0000680!1.64e-13!57;CL:0000056!1.64e-13!57;CL:0000355!1.64e-13!57;CL:0000393!5.66e-13!60;CL:0000211!5.66e-13!60;CL:0000187!6.71e-13!54;CL:0000192!1.54e-11!42;CL:0000514!1.54e-11!42;CL:0000723!8.14e-11!436;CL:0000048!1.73e-10!430;CL:0000034!3.45e-10!444;CL:0000359!9.12e-09!32;CL:0000063!1.16e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.34e-08;32!CL:0000192;7.26e-08;43!CL:0000187;1.28e-07;55!CL:0000393;7.09e-07;61!CL:0000211;7.09e-07;61!CL:0000134;9.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.96e-16,121;CL:0002321,1.84e-14,250;CL:0000680,1.66e-13,58;CL:0000056,1.66e-13,58;CL:0000355,1.66e-13,58;CL:0000393,5.05e-13,61;CL:0000211,5.05e-13,61;CL:0000187,7.31e-13,55;CL:0000723,3.88e-12,433;CL:0000048,8.81e-12,427;CL:0000034,1.23e-11,441;CL:0000192,3.66e-11,43;CL:0000514,3.66e-11,43;CL:0000359,5.55e-09,32;CL:0000057,2.71e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;7.26e-08;43!CL:0000355;3.48e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.07e-14!82;UBERON:0000914!1.05e-13!83;UBERON:0002329!1.05e-13!83;UBERON:0003077!1.05e-13!83;UBERON:0003059!1.05e-13!83;UBERON:0007282!1.05e-13!83;UBERON:0009618!1.05e-13!83;UBERON:0007285!1.05e-13!83;UBERON:0005256!2.52e-13!143;UBERON:0004290!3.66e-13!70;UBERON:0002049!2.12e-11!79;UBERON:0007798!2.12e-11!79;UBERON:0000490!2.60e-11!138;UBERON:0001134!1.01e-10!61;UBERON:0002036!1.01e-10!61;UBERON:0003082!1.01e-10!61;UBERON:0003914!2.10e-10!118;UBERON:0001637!1.33e-09!42;UBERON:0003509!1.33e-09!42;UBERON:0004572!1.33e-09!42;UBERON:0002385!1.42e-09!63;UBERON:0001015!1.42e-09!63;UBERON:0000383!1.42e-09!63;UBERON:0000055!2.68e-09!69;UBERON:0004872!6.24e-09!84;UBERON:0001981!1.91e-08!60;UBERON:0007500!1.91e-08!60;UBERON:0004537!1.91e-08!60;UBERON:0006965!1.91e-08!60;UBERON:0004535!5.49e-08!110;UBERON:0004573!6.42e-08!33;UBERON:0004571!6.42e-08!33;UBERON:0002100!9.57e-08!216;UBERON:0001009!1.09e-07!113 | |ontology_enrichment_uberon=UBERON:0000486!3.07e-14!82;UBERON:0000914!1.05e-13!83;UBERON:0002329!1.05e-13!83;UBERON:0003077!1.05e-13!83;UBERON:0003059!1.05e-13!83;UBERON:0007282!1.05e-13!83;UBERON:0009618!1.05e-13!83;UBERON:0007285!1.05e-13!83;UBERON:0005256!2.52e-13!143;UBERON:0004290!3.66e-13!70;UBERON:0002049!2.12e-11!79;UBERON:0007798!2.12e-11!79;UBERON:0000490!2.60e-11!138;UBERON:0001134!1.01e-10!61;UBERON:0002036!1.01e-10!61;UBERON:0003082!1.01e-10!61;UBERON:0003914!2.10e-10!118;UBERON:0001637!1.33e-09!42;UBERON:0003509!1.33e-09!42;UBERON:0004572!1.33e-09!42;UBERON:0002385!1.42e-09!63;UBERON:0001015!1.42e-09!63;UBERON:0000383!1.42e-09!63;UBERON:0000055!2.68e-09!69;UBERON:0004872!6.24e-09!84;UBERON:0001981!1.91e-08!60;UBERON:0007500!1.91e-08!60;UBERON:0004537!1.91e-08!60;UBERON:0006965!1.91e-08!60;UBERON:0004535!5.49e-08!110;UBERON:0004573!6.42e-08!33;UBERON:0004571!6.42e-08!33;UBERON:0002100!9.57e-08!216;UBERON:0001009!1.09e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.85e-07;42!UBERON:0003509;1.85e-07;42!UBERON:0004572;1.85e-07;42!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33 | |||
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| ||
|short_description=p@chr19:13051088..13051148,- | |short_description=p@chr19:13051088..13051148,- | ||
}} | }} |
Latest revision as of 03:53, 26 July 2015
Short description: | p@chr19:13051088..13051148, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13051088..13051148, - |
Coexpression cluster: | C1059_Fibroblast_Adipocyte_Smooth_Chondrocyte_neuroectodermal_Hair_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.96e-16 | 121 |
embryonic cell | 1.84e-14 | 250 |
muscle precursor cell | 1.66e-13 | 58 |
myoblast | 1.66e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.66e-13 | 58 |
electrically responsive cell | 5.05e-13 | 61 |
electrically active cell | 5.05e-13 | 61 |
muscle cell | 7.31e-13 | 55 |
somatic stem cell | 3.88e-12 | 433 |
multi fate stem cell | 8.81e-12 | 427 |
stem cell | 1.23e-11 | 441 |
smooth muscle cell | 3.66e-11 | 43 |
smooth muscle myoblast | 3.66e-11 | 43 |
vascular associated smooth muscle cell | 5.55e-09 | 32 |
fibroblast | 2.71e-07 | 76 |