FFCP PHASE1:Hg19::chr19:13051603..13051646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13051603..13051646,- | |||
|coexpression_cluster_id=C1059 | |||
|description=CAGE_peak_at_chr19:13051603..13051646,- | |description=CAGE_peak_at_chr19:13051603..13051646,- | ||
|id=chr19:13051603..13051646,- | |id=chr19:13051603..13051646,- | ||
|ontology_enrichment_celltype=CL:0000548!6.97e-22!679;CL:0000004!6.97e-22!679;CL:0000255!6.97e-22!679;CL:0000012!1.90e-21!682;CL:0000055!1.47e-19!180;CL:0000144!8.33e-17!625;CL:0002371!3.18e-15!591;CL:0002321!8.54e-14!248;CL:0000220!1.04e-13!246;CL:0000003!4.33e-13!722;CL:0000393!2.88e-11!60;CL:0000211!2.88e-11!60;CL:0000183!6.80e-11!59;CL:0000222!8.57e-11!119;CL:0000680!1.45e-10!57;CL:0000056!1.45e-10!57;CL:0000355!1.45e-10!57;CL:0000187!6.33e-10!54;CL:0000192!8.12e-10!42;CL:0000514!8.12e-10!42;CL:0000048!6.46e-08!430;CL:0000723!1.33e-07!436;CL:0000034!1.71e-07!444;CL:0000057!2.65e-07!75;CL:0000359!6.02e-07!32 | |ontology_enrichment_celltype=CL:0000548!6.97e-22!679;CL:0000004!6.97e-22!679;CL:0000255!6.97e-22!679;CL:0000012!1.90e-21!682;CL:0000055!1.47e-19!180;CL:0000144!8.33e-17!625;CL:0002371!3.18e-15!591;CL:0002321!8.54e-14!248;CL:0000220!1.04e-13!246;CL:0000003!4.33e-13!722;CL:0000393!2.88e-11!60;CL:0000211!2.88e-11!60;CL:0000183!6.80e-11!59;CL:0000222!8.57e-11!119;CL:0000680!1.45e-10!57;CL:0000056!1.45e-10!57;CL:0000355!1.45e-10!57;CL:0000187!6.33e-10!54;CL:0000192!8.12e-10!42;CL:0000514!8.12e-10!42;CL:0000048!6.46e-08!430;CL:0000723!1.33e-07!436;CL:0000034!1.71e-07!444;CL:0000057!2.65e-07!75;CL:0000359!6.02e-07!32 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.25e-12,250;CL:0000222,4.53e-11,121;CL:0000393,1.34e-10,61;CL:0000211,1.34e-10,61;CL:0000680,4.94e-10,58;CL:0000056,4.94e-10,58;CL:0000355,4.94e-10,58;CL:0000187,2.39e-09,55;CL:0000192,3.39e-09,43;CL:0000514,3.39e-09,43;CL:0000057,2.19e-08,76;CL:0000048,2.73e-08,427;CL:0000723,7.30e-08,433;CL:0000034,8.80e-08,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.98e-11!82;UBERON:0000914!2.66e-10!83;UBERON:0002329!2.66e-10!83;UBERON:0003077!2.66e-10!83;UBERON:0003059!2.66e-10!83;UBERON:0007282!2.66e-10!83;UBERON:0009618!2.66e-10!83;UBERON:0007285!2.66e-10!83;UBERON:0004290!3.60e-10!70;UBERON:0001134!3.23e-09!61;UBERON:0002036!3.23e-09!61;UBERON:0003082!3.23e-09!61;UBERON:0002385!8.28e-09!63;UBERON:0001015!8.28e-09!63;UBERON:0000383!8.28e-09!63;UBERON:0000490!2.19e-08!138;UBERON:0005256!4.10e-08!143;UBERON:0002049!6.62e-07!79;UBERON:0007798!6.62e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.03e-11,78;UBERON:0000486,5.55e-11,83;UBERON:0007524,3.45e-10,73;UBERON:0002329,3.93e-10,71;UBERON:0003059,3.93e-10,71;UBERON:0007282,3.93e-10,71;UBERON:0004290,3.93e-10,71;UBERON:0009618,3.93e-10,71;UBERON:0003077,1.06e-09,72;UBERON:0007285,1.06e-09,72;UBERON:0001134,5.36e-09,62;UBERON:0002036,5.36e-09,62;UBERON:0003082,5.36e-09,62;UBERON:0000490,7.47e-09,148;UBERON:0002385,1.68e-08,64;UBERON:0001015,1.68e-08,64;UBERON:0000383,1.68e-08,64;UBERON:0005256,3.23e-08,122;UBERON:0002049,7.50e-07,78;UBERON:0007798,7.50e-07,78;UBERON:0003104,8.38e-07,160;UBERON:0009142,8.38e-07,160 | |||
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| ||
|short_description=p@chr19:13051603..13051646,- | |short_description=p@chr19:13051603..13051646,- | ||
}} | }} |
Latest revision as of 03:54, 26 July 2015
Short description: | p@chr19:13051603..13051646, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13051603..13051646, - |
Coexpression cluster: | C1059_Fibroblast_Adipocyte_Smooth_Chondrocyte_neuroectodermal_Hair_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.25e-12 | 250 |
mesodermal cell | 4.53e-11 | 121 |
electrically responsive cell | 1.34e-10 | 61 |
electrically active cell | 1.34e-10 | 61 |
muscle precursor cell | 4.94e-10 | 58 |
myoblast | 4.94e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.94e-10 | 58 |
muscle cell | 2.39e-09 | 55 |
smooth muscle cell | 3.39e-09 | 43 |
smooth muscle myoblast | 3.39e-09 | 43 |
fibroblast | 2.19e-08 | 76 |
multi fate stem cell | 2.73e-08 | 427 |
somatic stem cell | 7.30e-08 | 433 |
stem cell | 8.80e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.03e-11 | 78 |
multilaminar epithelium | 5.55e-11 | 83 |
dense mesenchyme tissue | 3.45e-10 | 73 |
somite | 3.93e-10 | 71 |
presomitic mesoderm | 3.93e-10 | 71 |
presumptive segmental plate | 3.93e-10 | 71 |
dermomyotome | 3.93e-10 | 71 |
trunk paraxial mesoderm | 3.93e-10 | 71 |
paraxial mesoderm | 1.06e-09 | 72 |
presumptive paraxial mesoderm | 1.06e-09 | 72 |
skeletal muscle tissue | 5.36e-09 | 62 |
striated muscle tissue | 5.36e-09 | 62 |
myotome | 5.36e-09 | 62 |
unilaminar epithelium | 7.47e-09 | 148 |
muscle tissue | 1.68e-08 | 64 |
musculature | 1.68e-08 | 64 |
musculature of body | 1.68e-08 | 64 |
trunk mesenchyme | 3.23e-08 | 122 |
vasculature | 7.50e-07 | 78 |
vascular system | 7.50e-07 | 78 |
mesenchyme | 8.38e-07 | 160 |
entire embryonic mesenchyme | 8.38e-07 | 160 |