FFCP PHASE1:Hg19::chr19:2267604..2267606,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:2267604..2267606,- to FFCP PHASE1:Hg19::chr19:2267604..2267606,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:2267604..2267606,- | |||
|description=CAGE_peak_at_chr19:2267604..2267606,- | |||
|id=chr19:2267604..2267606,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.85e-12;3!CL:0000333;6.55e-08;5!CL:0002569;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.85e-12,3;CL:0000069,1.85e-12,3;CL:0000307,1.85e-12,3;CL:0000377,1.85e-12,3;CL:0002569,8.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.85e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.16e-07!235;DOID:14566!2.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3193;9.07e-18;2!DOID:962;9.07e-18;2!DOID:1192;2.59e-12;3!DOID:1115;1.38e-07;20!DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.07e-17,2;DOID:962,1.07e-17,2;DOID:1192,2.89e-12,3;DOID:1115,1.33e-07,20;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;9.07e-18;2!UBERON:0000013;6.55e-08;5!UBERON:0002410;6.55e-08;5!UBERON:0003422;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.07e-17,2;UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5;UBERON:0003422,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0.592713324460491,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.830091809617385,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.472775363535873,0,0,0,0,0,0,0,0,0,1.74362138052188,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0.592713324460491,0,0.136203406111576,0,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.830091809617385,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.472775363535873,0,0,0,0,0,0,0,0,0,1.74362138052188,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.218531143927391,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr19:2267604..2267606,- | |||
}} | }} |
Latest revision as of 05:47, 26 July 2015
Short description: | p@chr19:2267604..2267606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2267604..2267606, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.85e-12 | 3 |
branched duct epithelial cell | 1.85e-12 | 3 |
tracheal epithelial cell | 1.85e-12 | 3 |
tracheoblast | 1.85e-12 | 3 |
mesenchymal stem cell of umbilical cord | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.07e-17 | 2 |
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
mesenchyme of umbilical cord | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.07e-17 | 2 |
neurofibroma | 1.07e-17 | 2 |
peripheral nervous system neoplasm | 2.89e-12 | 3 |
sarcoma | 1.33e-07 | 20 |
neuroendocrine tumor | 8.97e-07 | 6 |