FFCP PHASE1:Hg19::chr19:38715129..38715133,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr19:38715129..38715133,+ to FFCP PHASE1:Hg19::chr19:38715129..38715133,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:38715129..38715133,+ | |||
|description=CAGE_peak_at_chr19:38715129..38715133,+ | |||
|id=chr19:38715129..38715133,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.01e-11;1!CL:1000600;1.01e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,6.97e-12,1;CL:1000600,6.97e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.04e-09;5 | |||
|ontology_enrichment_disease=DOID:162!2.65e-27!235;DOID:14566!7.91e-27!239;DOID:0050687!4.54e-20!143;DOID:0050686!9.25e-15!137;DOID:305!5.05e-14!106;DOID:1749!9.52e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.01e-11;1!DOID:4231;9.43e-07;2!DOID:1907;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.19e-11,1;DOID:162,8.28e-08,235;DOID:14566,1.35e-07,239;DOID:4231,8.93e-07,2;DOID:1907,8.93e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.01e-11;1!UBERON:0001256;1.01e-11;1!UBERON:0001259;1.01e-11;1!UBERON:0002046;3.04e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,6.97e-12,1;UBERON:0001256,6.97e-12,1;UBERON:0001259,6.97e-12,1;UBERON:0002046,3.59e-09,5;UBERON:0004117,3.59e-09,5;UBERON:0007689,3.59e-09,5;UBERON:0007123,3.59e-09,5;UBERON:0003091,3.59e-09,5 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0.23486899728753,0.161872944368132,0.561803226808994,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.895499018888713,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.275673144969061,0.214840489736547,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860468113224309,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0.284567373393656,0.318852545457645,0,0,0,0,0,0.228234679033192,0,0,0,0.481764225311099,0,0.425846237690326,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0.102268682502155,0.246169610922139,0,0.449341755736634,0,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.524759999977174,0,0.341380344856499,0,0.472775363535873,0,2.04123229368278,0,0,0,0,0,0,0,0.762569244632931,0,0,0.569710279235006,0,0.359030577639089,0.108647371922008,0,0,0,0,0.156980256395025,0,0.451191321234361,0,0.167821586975843,3.60532092175952,1.27149263184303,0.421996129056054,0.163232808159148,0.424059214301822,0.216388639742091,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0,0,0,1.32930774541437,0.330991955875499,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0.51595809741485,0.0967563312890851,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0.480952921509202,0,0.999048047910651,0.576361668616424,0.229073192331831,0,0.720273989940749,0.248505071130865,0,2.44627570932505,2.71967400412066,0.509991088181609,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0,0.0984274815147488,0.592713324460491,0,0,0,0,0,0.2249738915515,0,0,0,0,0,1.05600336519407,0.179287339332845,0.383830394638891,0,0,0.25426853765475,0,0,0,3.59190574687462,0.903017728242729,0,0.339936274560377,0,0,0.129282956361551,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0,0,0,0.124192805882767,0.968440444553616,0.874862855734746,0.303298235083296,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0.621748802331122,0.443565449968902,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0,0,0.337884881306145,0,0,0,0,0,0,0.490696182767533,1.63804924423206,0,0.633936370075881,0,0,0.516644938982447,3.97261167496785,0.184105950251841,0,0,0.383683113910955,0.215649622793364,1.10086159299127,0.218419276384028,0,0.212574920101683,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0.825788063434183,0.550285795565037,0.462102664601353,0,0,0,0,0,0,0,1.14640342257068,0.591424344868181,0.135075169236789,0,0.206686796501184,0,0,0,0,0.527613733078862,0.638812138197976,0,0,0,0,0,0.345701962667338,0,0.0679697329768317,0.131545547125698,0.945550727071746,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0.581207126840626,0,0.801711364730253,0,0,0,0,0,0.426067023795788,0,0,0,0,0,0.196300467230486,0.487671699929078,0,0,0,0,0,0.795803100645473,0.713520544665411,0.22589216407792,0.109940516745429,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0.499705779624645,0.71421575442263,2.47026410200984,0.160482733378337,0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| ||
|short_description=p@chr19:38715129..38715133,+ | |||
}} | }} |
Latest revision as of 07:16, 26 July 2015
Short description: | p@chr19:38715129..38715133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38715129..38715133, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 6.97e-12 | 1 |
lower urinary tract cell | 6.97e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 6.97e-12 | 1 |
wall of urinary bladder | 6.97e-12 | 1 |
mucosa of urinary bladder | 6.97e-12 | 1 |
thyroid gland | 3.59e-09 | 5 |
pharyngeal pouch | 3.59e-09 | 5 |
thyroid diverticulum | 3.59e-09 | 5 |
pharyngeal pouch 2 | 3.59e-09 | 5 |
thyroid primordium | 3.59e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.19e-11 | 1 |
cancer | 8.28e-08 | 235 |
disease of cellular proliferation | 1.35e-07 | 239 |
histiocytoma | 8.93e-07 | 2 |
malignant fibroxanthoma | 8.93e-07 | 2 |