FFCP PHASE1:Hg19::chr19:45412352..45412385,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-246bp_to_AJ249921_5end | |association_with_transcript=-246bp_to_AJ249921_5end | ||
|cluster_id=chr19:45412352..45412385,+ | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_3_at_AJ249921_5end | |description=CAGE_peak_3_at_AJ249921_5end | ||
|id=chr19:45412352..45412385,+ | |id=chr19:45412352..45412385,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.46e-26;6!CL:0002521;2.56e-14;3!CL:0002619;6.54e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.42e-26,6;CL:0002521,1.75e-14,3;CL:0002619,4.50e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-25!115;UBERON:0001017!7.49e-18!82;UBERON:0005743!3.35e-17!86;UBERON:0002616!1.90e-16!59;UBERON:0000073!4.23e-16!94;UBERON:0001016!4.23e-16!94;UBERON:0001049!2.44e-15!57;UBERON:0005068!2.44e-15!57;UBERON:0006241!2.44e-15!57;UBERON:0007135!2.44e-15!57;UBERON:0000955!3.80e-14!69;UBERON:0006238!3.80e-14!69;UBERON:0002020!7.46e-11!34;UBERON:0003528!7.46e-11!34;UBERON:0002780!7.77e-11!41;UBERON:0001890!7.77e-11!41;UBERON:0006240!7.77e-11!41;UBERON:0003080!2.05e-10!42;UBERON:0002791!1.01e-09!33;UBERON:0003075!1.65e-09!86;UBERON:0007284!1.65e-09!86;UBERON:0002346!2.46e-09!90;UBERON:0001893!2.83e-09!34;UBERON:0002308!1.66e-08!9;UBERON:0000125!1.66e-08!9;UBERON:0001869!5.58e-08!32;UBERON:0000153!2.81e-07!129;UBERON:0007811!2.81e-07!129;UBERON:0004121!3.36e-07!169;UBERON:0000924!3.44e-07!173;UBERON:0006601!3.44e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.56e-14;3!UBERON:0001875;9.58e-10;2!UBERON:0006514;9.58e-10;2!UBERON:0002072;9.07e-09;5!UBERON:0002107;2.77e-08;19!UBERON:0006925;2.77e-08;19!UBERON:0000125;7.95e-08;9!UBERON:0002308;7.95e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.75e-14,3;UBERON:0001875,1.46e-09,2;UBERON:0006514,1.46e-09,2;UBERON:0002072,7.26e-09,5;UBERON:0002107,2.75e-08,19;UBERON:0006925,2.75e-08,19;UBERON:0008836,2.75e-08,19;UBERON:0000125,9.48e-08,9;UBERON:0002308,9.48e-08,9;UBERON:0008835,4.61e-07,22;UBERON:0003894,4.61e-07,22 | |||
|phase1_expression=0,0.642301571672949,0,0,1.34088328328186,0,5.06599756336621,1.89515962028049,6.7908263331958,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01523926815932,1.94336199611388,2.57575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.232387885739037,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,22.8159062679296,13.7595810334868,42.5368732810611,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,1.17002132569619,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.901029173531752,1.14330573052231,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.979005787313703,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,2.56763392820352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,1.18219047581419,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,3.04543779442941,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,2.40168115483916,1.09524303113594,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0.393915911536118,0.494495150286999,0.0674035438541849,0,0,0,0.681017030557878,0.643012593860077,1.51293380256957,0.415440338029185,0,0,0.182248669974074,0,1.65491985328316,0.104909176269996,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,3.22414914091781,9.27548222385549,1.68067843270016,0.92562821219883,0,0,0.106787412567695,0,2.07119527673598,1.48849806543585,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0,0,0.665574309221114,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.82046545696302,0,0,0.322951291263702,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0.413373593002368,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.514464028312255,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,1.96308467114945,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,1.14671666521161,0.157771562193185,0.203974470572744,0,0.5290268405154,0,0,0,0.126166424835079,0,0.253397002022874,0.61193297845189,0.26721740526556,0.275684698604535,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.20686599172379,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0,0.642301571672949,0,0,1.34088328328186,0,5.06599756336621,1.89515962028049,6.7908263331958,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01523926815932,1.94336199611388,2.57575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.232387885739037,0.518305275076852,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,22.8159062679296,13.7595810334868,42.5368732810611,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,1.17002132569619,1.78357394746474,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.901029173531752,1.14330573052231,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.979005787313703,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,2.56763392820352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15436994738562,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,1.18219047581419,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0.134802265961354,0,3.04543779442941,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,2.40168115483916,1.09524303113594,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0.393915911536118,0.494495150286999,0.0674035438541849,0,0,0,0.681017030557878,0.643012593860077,1.51293380256957,0.415440338029185,0,0,0.182248669974074,0,1.65491985328316,0.104909176269996,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,3.22414914091781,9.27548222385549,1.68067843270016,0.92562821219883,0,0,0.106787412567695,0,2.07119527673598,1.48849806543585,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0.244052529803926,0,0,0.665574309221114,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.82046545696302,0,0,0.322951291263702,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56215619722769,0.413373593002368,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0.514464028312255,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,1.96308467114945,0.297046400327086,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,1.14671666521161,0.157771562193185,0.203974470572744,0,0.5290268405154,0,0,0,0.126166424835079,0,0.253397002022874,0.61193297845189,0.26721740526556,0.275684698604535,0.250707539292375,0.0757786982182394,0.267964130156178,0.829169439458779,0.20686599172379,0.213233981900981,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p3@AJ249921 | |short_description=p3@AJ249921 | ||
}} | }} |
Latest revision as of 14:47, 27 July 2015
Short description: | p3@AJ249921 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AJ249921_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | -246bp_to_AJ249921_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.42e-26 | 6 |
subcutaneous fat cell | 1.75e-14 | 3 |
adult endothelial progenitor cell | 4.50e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.75e-14 | 3 |
globus pallidus | 1.46e-09 | 2 |
pallidum | 1.46e-09 | 2 |
hypodermis | 7.26e-09 | 5 |
liver | 2.75e-08 | 19 |
digestive gland | 2.75e-08 | 19 |
liver bud | 2.75e-08 | 19 |
neural nucleus | 9.48e-08 | 9 |
nucleus of brain | 9.48e-08 | 9 |
hepatic diverticulum | 4.61e-07 | 22 |
liver primordium | 4.61e-07 | 22 |