FFCP PHASE1:Hg19::chr19:45412497..45412513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_AJ249921_5end | |association_with_transcript=-118bp_to_AJ249921_5end | ||
|cluster_id=chr19:45412497..45412513,+ | |||
|coexpression_cluster_id=C401 | |coexpression_cluster_id=C401 | ||
|description=CAGE_peak_5_at_AJ249921_5end | |description=CAGE_peak_5_at_AJ249921_5end | ||
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|ontology_enrichment_celltype=CL:0000181!6.12e-10!12;CL:0000417!6.12e-10!12;CL:0000668!6.12e-10!12;CL:0000414!6.12e-10!12;CL:0000412!6.12e-10!12;CL:0000182!6.12e-10!12 | |ontology_enrichment_celltype=CL:0000181!6.12e-10!12;CL:0000417!6.12e-10!12;CL:0000668!6.12e-10!12;CL:0000414!6.12e-10!12;CL:0000412!6.12e-10!12;CL:0000182!6.12e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.49e-35;6!CL:0002619;4.34e-18;3!CL:0000182;3.68e-08;12 | |ontology_enrichment_celltype_v019=CL:0000235;6.49e-35;6!CL:0002619;4.34e-18;3!CL:0000182;3.68e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.85e-35,6;CL:0002619,6.35e-18,3;CL:0000182,3.94e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.30e-07;1 | |ontology_enrichment_development_v019=UBERON:0006222;6.30e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.16e-21!57;UBERON:0005068!7.16e-21!57;UBERON:0006241!7.16e-21!57;UBERON:0007135!7.16e-21!57;UBERON:0007023!4.08e-20!115;UBERON:0002616!2.92e-18!59;UBERON:0001017!1.33e-17!82;UBERON:0005743!2.75e-17!86;UBERON:0002780!1.11e-15!41;UBERON:0001890!1.11e-15!41;UBERON:0006240!1.11e-15!41;UBERON:0002020!2.23e-15!34;UBERON:0003528!2.23e-15!34;UBERON:0003080!3.82e-15!42;UBERON:0000955!5.53e-15!69;UBERON:0006238!5.53e-15!69;UBERON:0001893!1.11e-14!34;UBERON:0000073!1.37e-14!94;UBERON:0001016!1.37e-14!94;UBERON:0003075!3.46e-14!86;UBERON:0007284!3.46e-14!86;UBERON:0002346!3.64e-14!90;UBERON:0002791!6.38e-14!33;UBERON:0001869!9.85e-13!32;UBERON:0003056!4.37e-11!61;UBERON:0002308!1.34e-10!9;UBERON:0000125!1.34e-10!9;UBERON:0002619!1.90e-09!22;UBERON:0005057!8.12e-09!26;UBERON:0002107!1.40e-08!19;UBERON:0006925!1.40e-08!19;UBERON:0008836!1.40e-08!19;UBERON:0009854!5.16e-08!23;UBERON:0000956!5.88e-08!25;UBERON:0000203!5.88e-08!25;UBERON:0000033!6.03e-08!123;UBERON:0002420!9.54e-08!9;UBERON:0007245!9.54e-08!9;UBERON:0010009!9.54e-08!9;UBERON:0010011!9.54e-08!9;UBERON:0000454!9.54e-08!9;UBERON:0009663!1.01e-07!7;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0001950!2.35e-07!20;UBERON:0008835!4.93e-07!22;UBERON:0003894!4.93e-07!22;UBERON:0003076!5.35e-07!15;UBERON:0003057!5.35e-07!15;UBERON:0009497!5.76e-07!25;UBERON:0000015!5.76e-07!25;UBERON:0002423!5.76e-07!25;UBERON:0006235!5.76e-07!25;UBERON:0004161!5.76e-07!25;UBERON:0002298!9.40e-07!8;UBERON:0009856!9.75e-07!26 | |ontology_enrichment_uberon=UBERON:0001049!7.16e-21!57;UBERON:0005068!7.16e-21!57;UBERON:0006241!7.16e-21!57;UBERON:0007135!7.16e-21!57;UBERON:0007023!4.08e-20!115;UBERON:0002616!2.92e-18!59;UBERON:0001017!1.33e-17!82;UBERON:0005743!2.75e-17!86;UBERON:0002780!1.11e-15!41;UBERON:0001890!1.11e-15!41;UBERON:0006240!1.11e-15!41;UBERON:0002020!2.23e-15!34;UBERON:0003528!2.23e-15!34;UBERON:0003080!3.82e-15!42;UBERON:0000955!5.53e-15!69;UBERON:0006238!5.53e-15!69;UBERON:0001893!1.11e-14!34;UBERON:0000073!1.37e-14!94;UBERON:0001016!1.37e-14!94;UBERON:0003075!3.46e-14!86;UBERON:0007284!3.46e-14!86;UBERON:0002346!3.64e-14!90;UBERON:0002791!6.38e-14!33;UBERON:0001869!9.85e-13!32;UBERON:0003056!4.37e-11!61;UBERON:0002308!1.34e-10!9;UBERON:0000125!1.34e-10!9;UBERON:0002619!1.90e-09!22;UBERON:0005057!8.12e-09!26;UBERON:0002107!1.40e-08!19;UBERON:0006925!1.40e-08!19;UBERON:0008836!1.40e-08!19;UBERON:0009854!5.16e-08!23;UBERON:0000956!5.88e-08!25;UBERON:0000203!5.88e-08!25;UBERON:0000033!6.03e-08!123;UBERON:0002420!9.54e-08!9;UBERON:0007245!9.54e-08!9;UBERON:0010009!9.54e-08!9;UBERON:0010011!9.54e-08!9;UBERON:0000454!9.54e-08!9;UBERON:0009663!1.01e-07!7;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0001950!2.35e-07!20;UBERON:0008835!4.93e-07!22;UBERON:0003894!4.93e-07!22;UBERON:0003076!5.35e-07!15;UBERON:0003057!5.35e-07!15;UBERON:0009497!5.76e-07!25;UBERON:0000015!5.76e-07!25;UBERON:0002423!5.76e-07!25;UBERON:0006235!5.76e-07!25;UBERON:0004161!5.76e-07!25;UBERON:0002298!9.40e-07!8;UBERON:0009856!9.75e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.40e-10;19!UBERON:0006925;1.40e-10;19!UBERON:0002423;6.72e-08;25!UBERON:0002038;6.30e-07;1!UBERON:0009661;6.30e-07;1!UBERON:0002950;6.30e-07;1!UBERON:0001891;6.30e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.40e-10;19!UBERON:0006925;1.40e-10;19!UBERON:0002423;6.72e-08;25!UBERON:0002038;6.30e-07;1!UBERON:0009661;6.30e-07;1!UBERON:0002950;6.30e-07;1!UBERON:0001891;6.30e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-10,19;UBERON:0006925,1.55e-10,19;UBERON:0008836,1.55e-10,19;UBERON:0008835,5.08e-09,22;UBERON:0003894,5.08e-09,22;UBERON:0009854,1.33e-08,23;UBERON:0007499,7.22e-08,25;UBERON:0009497,7.22e-08,25;UBERON:0000015,7.22e-08,25;UBERON:0002423,7.22e-08,25;UBERON:0006235,7.22e-08,25;UBERON:0004161,7.22e-08,25;UBERON:0009856,1.53e-07,26;UBERON:0002038,8.18e-07,1;UBERON:0009661,8.18e-07,1;UBERON:0002950,8.18e-07,1;UBERON:0001891,8.18e-07,1;UBERON:0009616,8.18e-07,1;UBERON:0010286,8.18e-07,1 | |||
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| ||
|short_description=p5@AJ249921 | |short_description=p5@AJ249921 | ||
}} | }} |
Latest revision as of 14:47, 27 July 2015
Short description: | p5@AJ249921 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AJ249921_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | -118bp_to_AJ249921_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.85e-35 | 6 |
adult endothelial progenitor cell | 6.35e-18 | 3 |
hepatocyte | 3.94e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.55e-10 | 19 |
digestive gland | 1.55e-10 | 19 |
liver bud | 1.55e-10 | 19 |
hepatic diverticulum | 5.08e-09 | 22 |
liver primordium | 5.08e-09 | 22 |
digestive tract diverticulum | 1.33e-08 | 23 |
epithelial sac | 7.22e-08 | 25 |
epithelium of foregut-midgut junction | 7.22e-08 | 25 |
anatomical boundary | 7.22e-08 | 25 |
hepatobiliary system | 7.22e-08 | 25 |
foregut-midgut junction | 7.22e-08 | 25 |
septum transversum | 7.22e-08 | 25 |
sac | 1.53e-07 | 26 |
substantia nigra | 8.18e-07 | 1 |
midbrain nucleus | 8.18e-07 | 1 |
regional part of midbrain | 8.18e-07 | 1 |
midbrain | 8.18e-07 | 1 |
presumptive midbrain | 8.18e-07 | 1 |
midbrain neural tube | 8.18e-07 | 1 |