FFCP PHASE1:Hg19::chr19:45412497..45412513,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-118bp_to_AJ249921_5end | |||
|cluster_id=chr19:45412497..45412513,+ | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_5_at_AJ249921_5end | |||
|id=chr19:45412497..45412513,+ | |||
|ontology_enrichment_celltype=CL:0000181!6.12e-10!12;CL:0000417!6.12e-10!12;CL:0000668!6.12e-10!12;CL:0000414!6.12e-10!12;CL:0000412!6.12e-10!12;CL:0000182!6.12e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.49e-35;6!CL:0002619;4.34e-18;3!CL:0000182;3.68e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,9.85e-35,6;CL:0002619,6.35e-18,3;CL:0000182,3.94e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.30e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.16e-21!57;UBERON:0005068!7.16e-21!57;UBERON:0006241!7.16e-21!57;UBERON:0007135!7.16e-21!57;UBERON:0007023!4.08e-20!115;UBERON:0002616!2.92e-18!59;UBERON:0001017!1.33e-17!82;UBERON:0005743!2.75e-17!86;UBERON:0002780!1.11e-15!41;UBERON:0001890!1.11e-15!41;UBERON:0006240!1.11e-15!41;UBERON:0002020!2.23e-15!34;UBERON:0003528!2.23e-15!34;UBERON:0003080!3.82e-15!42;UBERON:0000955!5.53e-15!69;UBERON:0006238!5.53e-15!69;UBERON:0001893!1.11e-14!34;UBERON:0000073!1.37e-14!94;UBERON:0001016!1.37e-14!94;UBERON:0003075!3.46e-14!86;UBERON:0007284!3.46e-14!86;UBERON:0002346!3.64e-14!90;UBERON:0002791!6.38e-14!33;UBERON:0001869!9.85e-13!32;UBERON:0003056!4.37e-11!61;UBERON:0002308!1.34e-10!9;UBERON:0000125!1.34e-10!9;UBERON:0002619!1.90e-09!22;UBERON:0005057!8.12e-09!26;UBERON:0002107!1.40e-08!19;UBERON:0006925!1.40e-08!19;UBERON:0008836!1.40e-08!19;UBERON:0009854!5.16e-08!23;UBERON:0000956!5.88e-08!25;UBERON:0000203!5.88e-08!25;UBERON:0000033!6.03e-08!123;UBERON:0002420!9.54e-08!9;UBERON:0007245!9.54e-08!9;UBERON:0010009!9.54e-08!9;UBERON:0010011!9.54e-08!9;UBERON:0000454!9.54e-08!9;UBERON:0009663!1.01e-07!7;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0001950!2.35e-07!20;UBERON:0008835!4.93e-07!22;UBERON:0003894!4.93e-07!22;UBERON:0003076!5.35e-07!15;UBERON:0003057!5.35e-07!15;UBERON:0009497!5.76e-07!25;UBERON:0000015!5.76e-07!25;UBERON:0002423!5.76e-07!25;UBERON:0006235!5.76e-07!25;UBERON:0004161!5.76e-07!25;UBERON:0002298!9.40e-07!8;UBERON:0009856!9.75e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.40e-10;19!UBERON:0006925;1.40e-10;19!UBERON:0002423;6.72e-08;25!UBERON:0002038;6.30e-07;1!UBERON:0009661;6.30e-07;1!UBERON:0002950;6.30e-07;1!UBERON:0001891;6.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-10,19;UBERON:0006925,1.55e-10,19;UBERON:0008836,1.55e-10,19;UBERON:0008835,5.08e-09,22;UBERON:0003894,5.08e-09,22;UBERON:0009854,1.33e-08,23;UBERON:0007499,7.22e-08,25;UBERON:0009497,7.22e-08,25;UBERON:0000015,7.22e-08,25;UBERON:0002423,7.22e-08,25;UBERON:0006235,7.22e-08,25;UBERON:0004161,7.22e-08,25;UBERON:0009856,1.53e-07,26;UBERON:0002038,8.18e-07,1;UBERON:0009661,8.18e-07,1;UBERON:0002950,8.18e-07,1;UBERON:0001891,8.18e-07,1;UBERON:0009616,8.18e-07,1;UBERON:0010286,8.18e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,2.08948502559871,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23915474239924,2.91504299417082,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.8852359365131,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0,0.348581828608555,0.414644220061482,0,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,7.86261773342101,21.859226547212,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,2.21595305478658,1.40402559083543,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,10.9461402577071,4.52031382288914,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,2.2594512186427,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.134802265961354,0.802577647298789,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0.114536596165916,1.02956998717179,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,1.16495949527454,0.315132729228895,0.329663433524666,0.337017719270924,0.0984274815147488,0,1.59045937961861,0.544813624446302,0.482259445395058,0.412618309791701,0.415440338029185,0,0,0.121499113316049,0,1.41850273138557,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,1.31897010310274,1.32506888912221,1.55139547633861,0.92562821219883,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11542187833102,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.478901577171454,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.685952037749674,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.628462359664008,0.280272163313789,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37415926980462,0,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,1.14671666521161,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0,0.643264296743914,0,0.0757786982182394,0.267964130156178,3.31667775783512,0.310298987585686,0,0,0.193766729508018,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@AJ249921 | |||
}} |
Latest revision as of 14:47, 27 July 2015
Short description: | p5@AJ249921 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AJ249921_5end |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | -118bp_to_AJ249921_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 9.85e-35 | 6 |
adult endothelial progenitor cell | 6.35e-18 | 3 |
hepatocyte | 3.94e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.55e-10 | 19 |
digestive gland | 1.55e-10 | 19 |
liver bud | 1.55e-10 | 19 |
hepatic diverticulum | 5.08e-09 | 22 |
liver primordium | 5.08e-09 | 22 |
digestive tract diverticulum | 1.33e-08 | 23 |
epithelial sac | 7.22e-08 | 25 |
epithelium of foregut-midgut junction | 7.22e-08 | 25 |
anatomical boundary | 7.22e-08 | 25 |
hepatobiliary system | 7.22e-08 | 25 |
foregut-midgut junction | 7.22e-08 | 25 |
septum transversum | 7.22e-08 | 25 |
sac | 1.53e-07 | 26 |
substantia nigra | 8.18e-07 | 1 |
midbrain nucleus | 8.18e-07 | 1 |
regional part of midbrain | 8.18e-07 | 1 |
midbrain | 8.18e-07 | 1 |
presumptive midbrain | 8.18e-07 | 1 |
midbrain neural tube | 8.18e-07 | 1 |