FFCP PHASE1:Hg19::chr19:56028924..56028947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56028924..56028947,+ | |||
|coexpression_cluster_id=C1063 | |coexpression_cluster_id=C1063 | ||
|description=CAGE_peak_at_chr19:56028924..56028947,+ | |description=CAGE_peak_at_chr19:56028924..56028947,+ | ||
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|ontology_enrichment_celltype=CL:0000057!1.07e-10!75;CL:0000055!4.52e-09!180;CL:0002620!4.19e-08!23 | |ontology_enrichment_celltype=CL:0000057!1.07e-10!75;CL:0000055!4.52e-09!180;CL:0002620!4.19e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.18e-15;23!CL:0002334;4.20e-07;12!CL:0000135;4.82e-07;3!CL:0000388;4.82e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;3.18e-15;23!CL:0002334;4.20e-07;12!CL:0000135;4.82e-07;3!CL:0000388;4.82e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.35e-15,23;CL:0000057,1.57e-12,76;CL:0000135,2.94e-07,3;CL:0000388,2.94e-07,3;CL:0002334,7.30e-07,12;CL:0002320,7.35e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.35e-07!14 | |ontology_enrichment_disease=DOID:2394!1.35e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-08;14!DOID:17;1.45e-07;5!DOID:450;1.45e-07;5!DOID:66;1.45e-07;5!DOID:423;1.45e-07;5!DOID:0080000;1.45e-07;5!DOID:11722;1.45e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;1.13e-08;14!DOID:17;1.45e-07;5!DOID:450;1.45e-07;5!DOID:66;1.45e-07;5!DOID:423;1.45e-07;5!DOID:0080000;1.45e-07;5!DOID:11722;1.45e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-08,14;DOID:17,1.67e-07,5;DOID:450,1.67e-07,5;DOID:66,1.67e-07,5;DOID:423,1.67e-07,5;DOID:0080000,1.67e-07,5;DOID:11722,1.67e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.82e-07;3!UBERON:0000043;4.82e-07;3!UBERON:0007845;4.82e-07;3!UBERON:0002097;9.28e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0007846;4.82e-07;3!UBERON:0000043;4.82e-07;3!UBERON:0007845;4.82e-07;3!UBERON:0002097;9.28e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.17e-10,46;UBERON:0002416,3.17e-10,46;UBERON:0002097,1.85e-09,41;UBERON:0002384,1.21e-07,371;UBERON:0007846,2.94e-07,3;UBERON:0000043,2.94e-07,3;UBERON:0007845,2.94e-07,3 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0,0,0,0,0,1.26343974685366,0.783556884599516,0,0,0.218441372130172,0,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0.612002073732759,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0.918251677112708,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,3.61439152384566,1.50401373190767,2.60723734129483,3.9764297352555,0.973269740605272,0.189069634328136,0.221729397462564,0.43917392846563,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.379891534993739,0.397227542439656,4.58938593198102,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0.910161361938026,0.718618141816238,0,0,0,0,0,0.150238058906597,0,5.74046834204358,3.41691822109708,5.72216133130817,2.10063767259082,0.92747276314595,6.1833729610951,4.46680455195816,8.10126394758078,2.43592512902997,6.05841058185875,1.38074847963449,1.77810662500693,7.4552014428489,1.61203357164224,1.01736355386293,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,0,8.36213219650751,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,0.176096868026452,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0.600686115687835,0,0.112131084345361,0,0.2933531432838,0.646358578788889,3.57656445851882,0.845302752556,2.12750493267896,4.16029747645464,0,0,0,0.428933980974443,4.34097284313154,0,0,0.355391948742546,0,1.80863626235752,0.871533458600294,4.69873058555668,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,2.4538298343828,0,0.271265023699736,1.45579603071565,4.46072471992904,0.315404830067869,2.81139395982512,0,0,1.03473071292505,3.32112799267718,0,1.04260337361699,1.95801157462741,2.05886054286514,0,0,0,0,0,0.30239029332968,0.992431231275107,3.06923946576125,2.24528075546459,1.53766979106841,1.02341449813341,2.2519548960105,0,1.23367755042124,0.532685175939381,0.574890092096664,1.03850885836724,0,0,0,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,4.82051789532479,0.386682873168488,0,0.15350367472613,0,0.429680979473094,0.870100163485371,0,2.31483292681517,0,0,0,0,1.85938219718914,5.35180989612088,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,1.21856744815642,0,0.545999645631943,1.27264888758341,0,0,0,0.438450885253763,1.15755106853338,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0.185803175125719,0,0,0,0,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,1.4098700508785,0,1.17206543417515,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.552896299656123,0.591095237907095,0,0,0,2.00070672109872,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0.247127877893006,0.208843899010911,0.337005664903385,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0.34945333648406,4.47163684426203,0,0,0,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,0.85381197895741,0,0,0,0,0,0,0.235694034616795,0.543616824294456,0.418411385249333,0,0.577901179803038,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0.429226048136571,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0.542999601753713,0.864221491201268,2.28611152076586,0,0.246277562248017,1.5334921960688,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,1.57204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0.74627401443437,2.33713309847224,1.10961172300523,0.947015026375446,0.251567901752575,7.11848977277229,0.228840068396924,0.604923695052956,0.310874401165561,1.03498604992744,0.955780602982214,2.24901556081802,1.08684069813382,4.14706207840855,0.797525143673985,6.78268580355254,3.90669783392768,5.33127297036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| ||
|short_description=p@chr19:56028924..56028947,+ | |short_description=p@chr19:56028924..56028947,+ | ||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56028924..56028947, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028924..56028947, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.35e-15 | 23 |
fibroblast | 1.57e-12 | 76 |
fibrocyte | 2.94e-07 | 3 |
tendon cell | 2.94e-07 | 3 |
preadipocyte | 7.30e-07 | 12 |
connective tissue cell | 7.35e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
integument | 3.17e-10 | 46 |
integumental system | 3.17e-10 | 46 |
skin of body | 1.85e-09 | 41 |
connective tissue | 1.21e-07 | 371 |
dense regular connective tissue | 2.94e-07 | 3 |
tendon | 2.94e-07 | 3 |
regular connective tissue | 2.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-08 | 14 |
musculoskeletal system disease | 1.67e-07 | 5 |
myotonic disease | 1.67e-07 | 5 |
muscle tissue disease | 1.67e-07 | 5 |
myopathy | 1.67e-07 | 5 |
muscular disease | 1.67e-07 | 5 |
myotonic dystrophy | 1.67e-07 | 5 |