FFCP PHASE1:Hg19::chr19:56028989..56029016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56028989..56029016,+ | |||
|coexpression_cluster_id=C1063 | |coexpression_cluster_id=C1063 | ||
|description=CAGE_peak_at_chr19:56028989..56029016,+ | |description=CAGE_peak_at_chr19:56028989..56029016,+ | ||
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|ontology_enrichment_celltype=CL:0000057!3.59e-08!75;CL:0002620!5.09e-08!23;CL:0000055!2.41e-07!180 | |ontology_enrichment_celltype=CL:0000057!3.59e-08!75;CL:0002620!5.09e-08!23;CL:0000055!2.41e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.12e-12;23!CL:0002570;9.53e-12;8!CL:0000134;1.30e-08;55!CL:0000135;8.82e-08;3!CL:0000388;8.82e-08;3!CL:0000048;1.58e-07;58 | |ontology_enrichment_celltype_v019=CL:0002620;8.12e-12;23!CL:0002570;9.53e-12;8!CL:0000134;1.30e-08;55!CL:0000135;8.82e-08;3!CL:0000388;8.82e-08;3!CL:0000048;1.58e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,4.22e-12,8;CL:0002620,6.88e-12,23;CL:0000135,8.62e-08,3;CL:0000388,8.62e-08,3;CL:0000057,1.06e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.08e-07!14 | |ontology_enrichment_disease=DOID:2394!6.08e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.58e-07,5;DOID:450,8.58e-07,5;DOID:66,8.58e-07,5;DOID:423,8.58e-07,5;DOID:0080000,8.58e-07,5;DOID:11722,8.58e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.66e-10;14!UBERON:0007846;8.82e-08;3!UBERON:0000043;8.82e-08;3!UBERON:0007845;8.82e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001013;7.66e-10;14!UBERON:0007846;8.82e-08;3!UBERON:0000043;8.82e-08;3!UBERON:0007845;8.82e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.00e-10,14;UBERON:0002199,2.83e-08,46;UBERON:0002416,2.83e-08,46;UBERON:0007846,8.62e-08,3;UBERON:0000043,8.62e-08,3;UBERON:0007845,8.62e-08,3;UBERON:0002097,1.68e-07,41 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,1.0007329835313,0,0,0,1.26343974685366,1.82829939739887,0,0,0.218441372130172,0.263766978228454,0.37129905888014,0.994192127183747,0.672325146451775,4.21886169616784,0.730310090387373,1.46379839637152,0.246242116153576,0.612002073732759,0.313454721478088,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.89151321907653,1.50401373190767,10.5737958841401,0,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0,0.529636723252875,4.01571269048339,0.354668382198357,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0,0.936480230490962,0,1.19558944441441,0,0,0,0.408308342509787,0,0.103325781175765,0,1.48360157567134,0,0,0.336672227908132,0,0,0,0.30648779579902,0.300476117813194,0,6.63741652048789,3.20336083227851,1.90738711043606,1.50045548042201,0.92747276314595,5.41045134095821,1.8611685633159,4.72573730275545,1.46155507741798,8.07788077581166,1.28869858099219,2.10139873864455,4.26011511019937,0.806016785821122,0.847802961552438,0,0,0,0.121973706129595,0,0.464775771478074,0.207322110030741,0,0.72995471815166,0,3.21620469096443,0,4.64367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.695582429850461,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,4.92663237895944,0.176096868026452,0,0,0,0,0,0,0,0.205654985406647,3.90445975197093,0,0,0,0.5867062865676,0.129271715757778,7.15312891703765,1.690605505112,1.06375246633948,4.16029747645464,0,0,0,2.00169191121407,5.42621605391443,0,0,0.355391948742546,0,0.301439377059586,0,4.1988656296464,0,0,0,0,0,0,0,0.821905290201534,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,3.6807447515742,0.500170521059677,0,1.45579603071565,5.88815663030634,0.473107245101804,3.63138386477411,0,0,0,1.32845119707087,0,1.82455590382974,2.34961388955289,2.05886054286514,0,0,0,0,0,0.604780586659361,0.496215615637554,1.99500565274481,1.96462066103151,0.512556597022804,0,0.965123526861645,0,0.462629081407967,0.887808626565635,0.410635780069046,1.03850885836724,0.581051892299796,0,0,0,0.229628896329213,0,1.04899531967539,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0.541892875087706,1.00337954770971,0,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0,0,0.537101224341368,0.435050081742686,0.0852266274161009,2.75999310504886,0,0,0,0,2.32422774648643,2.83331112147576,0,0,0,0,0,0,0.372158369359667,0,0,0.767693373934002,2.56763392820352,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.682499557039929,0.565621727814851,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0,0,1.06428319221179,3.58882980006029,2.96365403663912,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,1.2700414963433,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.121360521749513,0.111443384277478,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,1.59398390600856,0,0,0.409074730008619,0,0.622079175323615,0,0.179021174675609,0,0.789147245095469,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.442317039724898,0,0,0,0,2.23155749661011,0,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0.784901281975124,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0.970722711091971,0,0,0,1.04836000945218,6.87944129886466,0,0,0,0.872901148395775,0.176512253383001,0.225980740780532,0,0,0.0633107959558787,0,0.320635281006135,1.06726497369676,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0.577901179803038,0,0,0,0,0,0.558564802544508,1.14580212005842,0,0,0.429226048136571,0.223171457441873,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.121499113316049,0,0.315222829196793,0.209818352539992,0,0,0,0,1.32418394073086,0,0.542999601753713,0,1.95952416065645,0,0,0.851940108927109,0.113312091520126,0,0,0.129282956361551,0,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0,0,0.235265819698172,0,0,1.64180283175561,5.60911943633339,1.66441758450784,2.08343305802598,2.76724691927833,3.55924488638614,0,1.66354016139563,0.932623203496683,0.147855149989634,0.477890301491107,0.899606224327209,2.01841843939137,0.829412415681711,2.65841714557995,3.1304703708704,6.76159240487483,3.04644169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| ||
|short_description=p@chr19:56028989..56029016,+ | |short_description=p@chr19:56028989..56029016,+ | ||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56028989..56029016, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028989..56029016, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 4.22e-12 | 8 |
skin fibroblast | 6.88e-12 | 23 |
fibrocyte | 8.62e-08 | 3 |
tendon cell | 8.62e-08 | 3 |
fibroblast | 1.06e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.00e-10 | 14 |
integument | 2.83e-08 | 46 |
integumental system | 2.83e-08 | 46 |
dense regular connective tissue | 8.62e-08 | 3 |
tendon | 8.62e-08 | 3 |
regular connective tissue | 8.62e-08 | 3 |
skin of body | 1.68e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.58e-07 | 5 |
myotonic disease | 8.58e-07 | 5 |
muscle tissue disease | 8.58e-07 | 5 |
myopathy | 8.58e-07 | 5 |
muscular disease | 8.58e-07 | 5 |
myotonic dystrophy | 8.58e-07 | 5 |