FFCP PHASE1:Hg19::chr1:103354468..103354475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:103354468..103354475,- | |||
|coexpression_cluster_id=C926 | |coexpression_cluster_id=C926 | ||
|description=CAGE_peak_at_chr1:103354468..103354475,- | |description=CAGE_peak_at_chr1:103354468..103354475,- | ||
|id=chr1:103354468..103354475,- | |id=chr1:103354468..103354475,- | ||
|ontology_enrichment_celltype=CL:0002580!2.46e-10!3;CL:0002615!2.62e-10!3;CL:0002579!5.91e-10!3;CL:0002334!7.06e-09!12;CL:0002605!1.02e-08!3;CL:0002617!1.46e-07!2;CL:0000055!1.99e-07!180;CL:0000136!4.26e-07!15;CL:0002549!7.04e-07!2 | |ontology_enrichment_celltype=CL:0002580!2.46e-10!3;CL:0002615!2.62e-10!3;CL:0002579!5.91e-10!3;CL:0002334!7.06e-09!12;CL:0002605!1.02e-08!3;CL:0002617!1.46e-07!2;CL:0000055!1.99e-07!180;CL:0000136!4.26e-07!15;CL:0002549!7.04e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002617;7.10e-34;2!CL:0002580;3.11e-23;3!CL:0002615;5.76e-23;3!CL:0000136;1.22e-20;13!CL:0002334;3.85e-13;12!CL:0000135;7.92e-07;3!CL:0002579;7.92e-07;3!CL:0000388;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,8.39e-34,2;CL:0002580,2.94e-23,3;CL:0002615,5.15e-23,3;CL:0000136,6.06e-18,15;CL:0002334,4.01e-13,12;CL:0000135,8.15e-07,3;CL:0000388,8.15e-07,3;CL:0002579,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.78e-18;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.78e-09;2!DOID:4236;1.78e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.71e-09,2;DOID:4236,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.52e-18!6;UBERON:0002358!1.52e-18!6;UBERON:0003684!1.52e-18!6;UBERON:0001178!1.52e-18!6;UBERON:0005284!4.70e-10!5;UBERON:0002200!3.49e-09!11;UBERON:0006876!3.49e-09!11;UBERON:0004457!7.27e-09!12;UBERON:0000042!7.27e-09!12;UBERON:0000310!7.25e-08!10;UBERON:0001443!4.16e-07!11;UBERON:0003947!7.04e-07!2;UBERON:0005629!7.04e-07!2;UBERON:0005358!7.04e-07!2;UBERON:0001886!7.04e-07!2;UBERON:0004086!7.04e-07!2;UBERON:0005282!7.04e-07!2;UBERON:0005281!7.04e-07!2 | |ontology_enrichment_uberon=UBERON:0003688!1.52e-18!6;UBERON:0002358!1.52e-18!6;UBERON:0003684!1.52e-18!6;UBERON:0001178!1.52e-18!6;UBERON:0005284!4.70e-10!5;UBERON:0002200!3.49e-09!11;UBERON:0006876!3.49e-09!11;UBERON:0004457!7.27e-09!12;UBERON:0000042!7.27e-09!12;UBERON:0000310!7.25e-08!10;UBERON:0001443!4.16e-07!11;UBERON:0003947!7.04e-07!2;UBERON:0005629!7.04e-07!2;UBERON:0005358!7.04e-07!2;UBERON:0001886!7.04e-07!2;UBERON:0004086!7.04e-07!2;UBERON:0005282!7.04e-07!2;UBERON:0005281!7.04e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.50e-27;10!UBERON:0003688;2.23e-25;6!UBERON:0002358;2.23e-25;6!UBERON:0003684;2.23e-25;6!UBERON:0001178;2.23e-25;6!UBERON:0001443;1.87e-24;11!UBERON:0004457;3.63e-17;9!UBERON:0000042;3.63e-17;9!UBERON:0007846;7.92e-07;3!UBERON:0000043;7.92e-07;3!UBERON:0007845;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.76e-27,10;UBERON:0003688,2.33e-25,6;UBERON:0002358,2.33e-25,6;UBERON:0003684,2.33e-25,6;UBERON:0001178,2.33e-25,6;UBERON:0001443,1.93e-24,11;UBERON:0004457,4.93e-13,12;UBERON:0000042,4.93e-13,12;UBERON:0009569,7.03e-09,112;UBERON:0007846,8.15e-07,3;UBERON:0000043,8.15e-07,3;UBERON:0007845,8.15e-07,3 | |||
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|phase1_expression=1.2717486548939,3.42560838225573,0.563817616383885,3.00219895059391,1.34088328328186,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,7.29952305453954,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0,0,0,0,0.37223371266318,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,5.37116906508219,2.24528075546459,0.384417447767103,2.04682899626681,0.64341568457443,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23197010900051,0,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr1:103354468..103354475,- | |short_description=p@chr1:103354468..103354475,- | ||
}} | }} |
Latest revision as of 19:04, 27 July 2015
Short description: | p@chr1:103354468..103354475, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:103354468..103354475, - |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 8.39e-34 | 2 |
preadipocyte of the breast | 2.94e-23 | 3 |
adipocyte of omentum tissue | 5.15e-23 | 3 |
fat cell | 6.06e-18 | 15 |
preadipocyte | 4.01e-13 | 12 |
fibrocyte | 8.15e-07 | 3 |
tendon cell | 8.15e-07 | 3 |
omentum preadipocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 7.76e-27 | 10 |
omentum | 2.33e-25 | 6 |
peritoneum | 2.33e-25 | 6 |
abdominal cavity | 2.33e-25 | 6 |
visceral peritoneum | 2.33e-25 | 6 |
chest | 1.93e-24 | 11 |
cavity lining | 4.93e-13 | 12 |
serous membrane | 4.93e-13 | 12 |
subdivision of trunk | 7.03e-09 | 112 |
dense regular connective tissue | 8.15e-07 | 3 |
tendon | 8.15e-07 | 3 |
regular connective tissue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.71e-09 | 2 |
carcinosarcoma | 1.71e-09 | 2 |