FFCP PHASE1:Hg19::chr1:103471622..103471650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:103471622..103471650,+ | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_at_chr1:103471622..103471650,+ | |description=CAGE_peak_at_chr1:103471622..103471650,+ | ||
|id=chr1:103471622..103471650,+ | |id=chr1:103471622..103471650,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.08e-11!180;CL:0000149!1.41e-10!4;CL:0002580!1.28e-09!3;CL:0002579!1.61e-08!3;CL:0000325!1.83e-08!39;CL:0002586!2.36e-08!3;CL:0000147!5.98e-08!14;CL:0002334!8.80e-08!12;CL:0002605!9.50e-08!3;CL:0002617!8.53e-07!2 | |ontology_enrichment_celltype=CL:0000055!5.08e-11!180;CL:0000149!1.41e-10!4;CL:0002580!1.28e-09!3;CL:0002579!1.61e-08!3;CL:0000325!1.83e-08!39;CL:0002586!2.36e-08!3;CL:0000147!5.98e-08!14;CL:0002334!8.80e-08!12;CL:0002605!9.50e-08!3;CL:0002617!8.53e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002580;9.98e-60;3!CL:0002615;2.38e-27;3!CL:0002334;1.50e-15;12!CL:0000136;2.33e-14;13!CL:0002561;2.35e-11;2!CL:0002617;3.52e-11;2!CL:0000135;7.02e-08;3!CL:0000388;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.68e-60,3;CL:0002615,3.11e-27,3;CL:0002334,1.36e-15,12;CL:0000136,1.52e-12,15;CL:0002561,2.23e-11,2;CL:0002617,2.73e-11,2;CL:0000135,8.29e-08,3;CL:0000388,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!9.62e-14!11;UBERON:0003688!2.20e-11!6;UBERON:0002358!2.20e-11!6;UBERON:0003684!2.20e-11!6;UBERON:0001178!2.20e-11!6;UBERON:0002200!4.90e-11!11;UBERON:0006876!4.90e-11!11;UBERON:0005284!3.58e-09!5;UBERON:0001781!2.36e-08!3;UBERON:0001782!2.36e-08!3;UBERON:0005424!2.36e-08!3;UBERON:0000475!1.69e-07!365;UBERON:0000019!2.39e-07!19;UBERON:0000047!2.39e-07!19;UBERON:0004088!2.39e-07!19;UBERON:0003072!2.39e-07!19;UBERON:0003071!2.39e-07!19;UBERON:0004128!2.39e-07!19;UBERON:0000310!4.22e-07!10;UBERON:0000970!6.53e-07!20 | |ontology_enrichment_uberon=UBERON:0007625!9.62e-14!11;UBERON:0003688!2.20e-11!6;UBERON:0002358!2.20e-11!6;UBERON:0003684!2.20e-11!6;UBERON:0001178!2.20e-11!6;UBERON:0002200!4.90e-11!11;UBERON:0006876!4.90e-11!11;UBERON:0005284!3.58e-09!5;UBERON:0001781!2.36e-08!3;UBERON:0001782!2.36e-08!3;UBERON:0005424!2.36e-08!3;UBERON:0000475!1.69e-07!365;UBERON:0000019!2.39e-07!19;UBERON:0000047!2.39e-07!19;UBERON:0004088!2.39e-07!19;UBERON:0003072!2.39e-07!19;UBERON:0003071!2.39e-07!19;UBERON:0004128!2.39e-07!19;UBERON:0000310!4.22e-07!10;UBERON:0000970!6.53e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.18e-32;10!UBERON:0001443;4.38e-29;11!UBERON:0003688;3.25e-14;6!UBERON:0002358;3.25e-14;6!UBERON:0003684;3.25e-14;6!UBERON:0001178;3.25e-14;6!UBERON:0005933;2.35e-11;2!UBERON:0005942;2.35e-11;2!UBERON:0005932;2.35e-11;2!UBERON:0004457;8.46e-10;9!UBERON:0000042;8.46e-10;9!UBERON:0007846;7.02e-08;3!UBERON:0000043;7.02e-08;3!UBERON:0007845;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.32e-32,10;UBERON:0001443,3.16e-29,11;UBERON:0003688,3.71e-14,6;UBERON:0002358,3.71e-14,6;UBERON:0003684,3.71e-14,6;UBERON:0001178,3.71e-14,6;UBERON:0005933,2.23e-11,2;UBERON:0005942,2.23e-11,2;UBERON:0005932,2.23e-11,2;UBERON:0009569,1.97e-08,112;UBERON:0007846,8.29e-08,3;UBERON:0000043,8.29e-08,3;UBERON:0007845,8.29e-08,3;UBERON:0004457,1.52e-07,12;UBERON:0000042,1.52e-07,12 | |||
|phase1_expression=0.54503513781167,1.92690471501885,1.12763523276777,2.00146596706261,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40644409211845,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0.427114777637135,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,8.74733247741956,1.68396056659844,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.366277859273374,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,1.92690471501885,1.12763523276777,2.00146596706261,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40644409211845,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0.427114777637135,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,8.74733247741956,1.68396056659844,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.366277859273374,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:103471622..103471650,+ | |short_description=p@chr1:103471622..103471650,+ | ||
}} | }} |
Latest revision as of 19:04, 27 July 2015
Short description: | p@chr1:103471622..103471650, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:103471622..103471650, + |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.68e-60 | 3 |
adipocyte of omentum tissue | 3.11e-27 | 3 |
preadipocyte | 1.36e-15 | 12 |
fat cell | 1.52e-12 | 15 |
outer root sheath cell | 2.23e-11 | 2 |
adipocyte of breast | 2.73e-11 | 2 |
fibrocyte | 8.29e-08 | 3 |
tendon cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 4.32e-32 | 10 |
chest | 3.16e-29 | 11 |
omentum | 3.71e-14 | 6 |
peritoneum | 3.71e-14 | 6 |
abdominal cavity | 3.71e-14 | 6 |
visceral peritoneum | 3.71e-14 | 6 |
hair root sheath | 2.23e-11 | 2 |
hair outer root sheath | 2.23e-11 | 2 |
bulb of hair follicle | 2.23e-11 | 2 |
subdivision of trunk | 1.97e-08 | 112 |
dense regular connective tissue | 8.29e-08 | 3 |
tendon | 8.29e-08 | 3 |
regular connective tissue | 8.29e-08 | 3 |
cavity lining | 1.52e-07 | 12 |
serous membrane | 1.52e-07 | 12 |