FFCP PHASE1:Hg19::chr1:109643457..109643461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:109643457..109643461,+ | |||
|description=CAGE_peak_at_chr1:109643457..109643461,+ | |description=CAGE_peak_at_chr1:109643457..109643461,+ | ||
|id=chr1:109643457..109643461,+ | |id=chr1:109643457..109643461,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.31e-14;1!CL:0000791;2.79e-07;18!CL:0000789;2.79e-07;18!CL:0002419;2.79e-07;18 | |ontology_enrichment_celltype_v019=CL:0002591;1.31e-14;1!CL:0000791;2.79e-07;18!CL:0000789;2.79e-07;18!CL:0002419;2.79e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.84e-14,1;CL:0000791,3.46e-07,18;CL:0000789,3.46e-07,18;CL:0002420,3.46e-07,18;CL:0002419,3.46e-07,18;CL:0000790,3.46e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.79e-07;18 | |ontology_enrichment_development_v019=CL:0000790;2.79e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.94e-08;2!UBERON:0000078;5.94e-08;2!UBERON:0002012;5.94e-08;2!UBERON:0008886;5.94e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000007;5.94e-08;2!UBERON:0000078;5.94e-08;2!UBERON:0002012;5.94e-08;2!UBERON:0008886;5.94e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.02e-08,2;UBERON:0000078,7.03e-08,2;UBERON:0007497,7.03e-08,2;UBERON:0003643,7.03e-08,2;UBERON:0003504,7.03e-08,2;UBERON:0003469,7.03e-08,2;UBERON:0003496,7.03e-08,2;UBERON:0002012,7.03e-08,2;UBERON:0008886,7.03e-08,2;UBERON:0007303,7.03e-08,2;UBERON:0002061,7.03e-08,2;UBERON:0005432,7.03e-08,2;UBERON:0004363,7.03e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.821246550437305,0.376627918784408,0.458480434487708,0.57470412614962,0.629686250509434,0.393364276848904,0,0.309632246632152,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0.512321413058201,0,1.03423704220986,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0,1.21079900526674,0,0,0,0,0,0.336985893439485,0.150176892841506,0,0.570025487482497,0,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,1.17447437874188,0,0,0,0.263384084775077,0.196709770113833,2.35806457649499,0.411202997999018,0,0.977766799900771,0.946895611469467,0,0,0,0.443067789167242,0,0.25618263945135,0,0,0,0,0.593146252648242,0,0,0,0.766440987203842,1.03088233644789,0,0,0,0,0,0,0,0,0,1.00803371612366,1.06976078313403,0.724122019413995,0,0.670700859703636,0,0,0,0,0,0,0,0.665188192387692,0,0.196468613246569,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,1.58040879591855,0,0,0,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0,0,0.492663237895943,0.176096868026452,0.829312462163088,0.432359860250884,0.50496973370552,0.190493682876507,0,1.17217447210047,0,0.205654985406647,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.641715181398742,0,0,0,0.335032530668698,1.91381625495949,0,0,0.414415513436035,0.49076596687656,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0.496215615637554,0.920771839728375,0,0,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0.27470839445503,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0.893288987462089,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.719489830333259,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.497992903438899,0,0.59873811429845,0.191505370132367,0,0.324621940274555,0.280797178113459,0.228234679033192,0.47003968731907,0,0,0,0.201799707191048,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0,0.281338832821026,0.111308705022906,0.329607748453519,0.422250816255987,0,0,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0.173624994933292,0,0.723578631752448,0,0.552896299656123,0,0,0.32681539055697,0,0.0769502585037971,0.227884111694002,0.23056390438806,0,0.325942115766024,0,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.476809736941136,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.337005664903385,0,0.234264445725339,0.547364367646998,0.19566461893209,0,0.789168805698781,0,0,0.189559738885464,0.751617097072463,0.414752765588989,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0.580537987734511,0.219267951258557,0.492692742319255,0,0.0882561266915003,0,0.137041924646751,0,0.443175571691151,0,0,0,0,0.432271251462318,0.229073192331831,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0.268733889946905,0,1.16495949527454,0.315132729228895,0.164831716762333,0.337017719270924,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0.607495566580247,0,0.0788057072991982,0.314727528809989,0.105600336519406,0,0.191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| ||
|short_description=p@chr1:109643457..109643461,+ | |short_description=p@chr1:109643457..109643461,+ | ||
}} | }} |
Latest revision as of 19:17, 27 July 2015
Short description: | p@chr1:109643457..109643461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:109643457..109643461, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.84e-14 | 1 |
mature alpha-beta T cell | 3.46e-07 | 18 |
alpha-beta T cell | 3.46e-07 | 18 |
immature T cell | 3.46e-07 | 18 |
mature T cell | 3.46e-07 | 18 |
immature alpha-beta T cell | 3.46e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.02e-08 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.03e-08 | 2 |
developing epithelial placode | 7.03e-08 | 2 |
respiratory system arterial blood vessel | 7.03e-08 | 2 |
respiratory system blood vessel | 7.03e-08 | 2 |
respiratory system artery | 7.03e-08 | 2 |
head blood vessel | 7.03e-08 | 2 |
pulmonary artery | 7.03e-08 | 2 |
pulmonary vascular system | 7.03e-08 | 2 |
pharyngeal vasculature | 7.03e-08 | 2 |
truncus arteriosus | 7.03e-08 | 2 |
aortic sac | 7.03e-08 | 2 |
pharyngeal arch artery | 7.03e-08 | 2 |