FFCP PHASE1:Hg19::chr1:1288124..1288161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1288124..1288161,- | |||
|description=CAGE_peak_at_chr1:1288124..1288161,- | |description=CAGE_peak_at_chr1:1288124..1288161,- | ||
|id=chr1:1288124..1288161,- | |id=chr1:1288124..1288161,- | ||
|ontology_enrichment_celltype=CL:0000057!8.62e-22!75;CL:0000055!1.03e-20!180;CL:0002620!2.28e-12!23;CL:0002334!4.41e-08!12 | |ontology_enrichment_celltype=CL:0000057!8.62e-22!75;CL:0000055!1.03e-20!180;CL:0002620!2.28e-12!23;CL:0002334!4.41e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.44e-16;23!CL:0002580;1.52e-09;3!CL:0000057;2.97e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;9.44e-16;23!CL:0002580;1.52e-09;3!CL:0000057;2.97e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.47e-17,76;CL:0002620,9.66e-16,23;CL:0002580,2.12e-09,3;CL:0002320,9.76e-08,361;CL:0002617,8.31e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.57e-10;5!DOID:450;6.57e-10;5!DOID:66;6.57e-10;5!DOID:423;6.57e-10;5!DOID:0080000;6.57e-10;5!DOID:11722;6.57e-10;5 | |ontology_enrichment_disease_v019=DOID:17;6.57e-10;5!DOID:450;6.57e-10;5!DOID:66;6.57e-10;5!DOID:423;6.57e-10;5!DOID:0080000;6.57e-10;5!DOID:11722;6.57e-10;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,6.32e-10,5;DOID:450,6.32e-10,5;DOID:66,6.32e-10,5;DOID:423,6.32e-10,5;DOID:0080000,6.32e-10,5;DOID:11722,6.32e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.60e-07!365;UBERON:0003102!9.19e-07!95 | |ontology_enrichment_uberon=UBERON:0000475!2.60e-07!365;UBERON:0003102!9.19e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.23e-08;6!UBERON:0002358;2.23e-08;6!UBERON:0003684;2.23e-08;6!UBERON:0001178;2.23e-08;6!UBERON:0002097;2.31e-08;41!UBERON:0004457;4.85e-08;9!UBERON:0000042;4.85e-08;9!UBERON:0002199;9.72e-08;46!UBERON:0002416;9.72e-08;46!UBERON:0000310;4.67e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.23e-08;6!UBERON:0002358;2.23e-08;6!UBERON:0003684;2.23e-08;6!UBERON:0001178;2.23e-08;6!UBERON:0002097;2.31e-08;41!UBERON:0004457;4.85e-08;9!UBERON:0000042;4.85e-08;9!UBERON:0002199;9.72e-08;46!UBERON:0002416;9.72e-08;46!UBERON:0000310;4.67e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.62e-10,41;UBERON:0002199,5.16e-09,46;UBERON:0002416,5.16e-09,46;UBERON:0002384,5.91e-09,371;UBERON:0003688,1.73e-08,6;UBERON:0002358,1.73e-08,6;UBERON:0003684,1.73e-08,6;UBERON:0001178,1.73e-08,6;UBERON:0000310,4.66e-07,10 | |||
|phase1_expression=5.4503513781167,1.71280419112787,14.9411668341729,0,1.78784437770915,0,0,0,0.261185628199839,0.245733936501509,0,2.62129646556207,0.527533956456907,2.72285976512103,0.331397375727916,0.672325146451775,0,0,0,1.96993692922861,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,6.50590474292219,1.00267582127178,0.434539556882471,0.795285947051099,0,0.283604451492204,0.443458794925128,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,3.03913227994991,0.397227542439656,3.72887606973458,0.709336764396714,0.560677600142307,1.06748995729705,0.74000264525148,0,0,0,3.48122083583342,0,0.468642863667593,0.936480230490962,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0.673344455816265,0,0,1.31693286264251,0.30648779579902,0.150238058906597,0,5.02290979928813,2.98980344345994,4.23863802319124,3.00091096084402,0.103052529238439,1.28820270022815,7.63079110959518,2.70042131586026,1.16924406193438,3.78650661366172,5.06274442532646,0,5.68015348026583,0.403008392910561,2.37384829234683,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,3.57656445851882,0.845302752556,1.59562869950922,2.08014873822732,1.28603687131071,0,0.266422179016099,0,9.76718889704597,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,1.4377491329495,0,0,0.579125226670317,0.61642896765115,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,3.43536176813592,1.50051156317903,0.271265023699736,1.87173775377726,2.14114786556594,0.788512075169673,0.585707074963566,0.902838299183157,0,0,1.32845119707087,0.184369168541703,1.56390506042549,9.00685324328607,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,6.4508030032882,6.44540287809862,1.12264037773229,23.9620209108161,13.816095724801,0.321707842287215,0,0.154209693802656,0.355123450626254,0.657017248110473,0.519254429183621,0.232420756919918,0,0,0,1.03333003348146,0.182091168006717,0.262248829918848,0,0,1.56869953835371,0,0.105551628892876,0,0,0,0,2.70946437543853,0,0,0,0.447749509444357,0,0,0,1.31205858279882,0,0.103041011647722,0.0915694648183434,0.247528499761764,0,0,0,0.386682873168488,0,0,0.137836572484531,0.751941714077915,0,0.0852266274161009,0.890320356467374,0,0,0,0,0.929691098594572,6.92587163027408,0,0.308033580176089,0.532306030317022,4.34966496037536,0.74129687641568,0,0,0.316379424718726,0,0,0.855877976067841,0.95460974377781,0,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0,0,0,0,2.04749867111979,0.424216295861138,0,1.65409603063837,0,0.438450885253763,0.578775534266688,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.633322905892992,1.97576935775941,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,1.22864280839693,0,0,0,0,0,0.996239941255349,1.10513566212459,0,0,0,0,0,0,0,0.493217028184668,0,2.22273980289274,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.692552326534174,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0.176512253383001,0.451961481561065,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,1.5334921960688,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.895528817321244,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,0,0,0,1.08806040407946,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0.400027764663154,2.40376993627955,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.736423801007363,0,0,0,0,0,0,0,0,0.619678821295011,0,1.27201740261367,0,0,1.76337971845342,0.918736432059601,0,0,0,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0.994581110581374,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,1.82631744101899,0.215927591218621,0.9555033757741,0.285906176706625,0,0,0.173858272302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| ||
|short_description=p@chr1:1288124..1288161,- | |short_description=p@chr1:1288124..1288161,- | ||
}} | }} |
Latest revision as of 20:32, 27 July 2015
Short description: | p@chr1:1288124..1288161, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1288124..1288161, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.47e-17 | 76 |
skin fibroblast | 9.66e-16 | 23 |
preadipocyte of the breast | 2.12e-09 | 3 |
connective tissue cell | 9.76e-08 | 361 |
adipocyte of breast | 8.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.62e-10 | 41 |
integument | 5.16e-09 | 46 |
integumental system | 5.16e-09 | 46 |
connective tissue | 5.91e-09 | 371 |
omentum | 1.73e-08 | 6 |
peritoneum | 1.73e-08 | 6 |
abdominal cavity | 1.73e-08 | 6 |
visceral peritoneum | 1.73e-08 | 6 |
breast | 4.66e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.32e-10 | 5 |
myotonic disease | 6.32e-10 | 5 |
muscle tissue disease | 6.32e-10 | 5 |
myopathy | 6.32e-10 | 5 |
muscular disease | 6.32e-10 | 5 |
myotonic dystrophy | 6.32e-10 | 5 |