FFCP PHASE1:Hg19::chr1:17519128..17519138,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:17519128..17519138,+
|short_description=p@chr1:17519128..17519138,+
|description=CAGE_peak_at_chr1:17519128..17519138,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:17519128..17519138,+ | |||
|description=CAGE_peak_at_chr1:17519128..17519138,+ | |||
|id=chr1:17519128..17519138,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.44e-16!254;CL:0002076!1.74e-14!43;CL:0000128!2.04e-14!7;CL:0000126!2.04e-14!7;CL:0000127!2.04e-14!7;CL:0002453!2.04e-14!7;CL:0002368!7.81e-12!13;CL:0000223!1.59e-11!59;CL:0002321!7.34e-09!248;CL:0000220!1.70e-08!246;CL:0000239!5.96e-08!3;CL:1000615!5.96e-08!3;CL:0002306!5.96e-08!3;CL:0002621!6.51e-08!3;CL:0002159!1.74e-07!13;CL:0002541!2.15e-07!3;CL:0002166!2.15e-07!3;CL:0002603!2.49e-07!3;CL:0002328!3.71e-07!3;CL:0002605!5.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;5.52e-27;3!CL:1000615;5.52e-27;3!CL:0002306;5.52e-27;3!CL:0002621;1.27e-26;3!CL:0002541;9.93e-13;3!CL:1000507;1.72e-08;10!CL:1000494;1.72e-08;10!CL:0002076;2.58e-07;42!CL:0002681;3.76e-07;12!CL:0002584;3.76e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.07e-27,3;CL:1000615,5.07e-27,3;CL:0002306,5.07e-27,3;CL:0002621,7.22e-27,3;CL:0002541,1.05e-12,3;CL:1000507,1.68e-08,10;CL:1000494,1.68e-08,10;CL:0002681,3.68e-07,12;CL:0002584,3.68e-07,12;CL:0002076,4.10e-07,42;CL:0000066,4.46e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.97e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.16e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.67e-10!14;UBERON:0000158!1.67e-10!14;UBERON:0006853!5.96e-08!3;UBERON:0007685!5.96e-08!3;UBERON:0004134!5.96e-08!3;UBERON:0001949!6.51e-08!3;UBERON:0000476!2.15e-07!3;UBERON:0000920!2.15e-07!3;UBERON:0000305!3.37e-07!7;UBERON:0004815!3.71e-07!3;UBERON:0002031!3.71e-07!3;UBERON:0001004!3.78e-07!72;UBERON:0004119!5.54e-07!169;UBERON:0000925!5.54e-07!169;UBERON:0006595!5.54e-07!169;UBERON:0000065!7.12e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;5.52e-27;3!UBERON:0007685;5.52e-27;3!UBERON:0004134;5.52e-27;3!UBERON:0001949;1.27e-26;3!UBERON:0003124;9.93e-13;3!UBERON:0000920;9.93e-13;3!UBERON:0003929;9.25e-12;7!UBERON:0003350;2.34e-10;8!UBERON:0001828;2.34e-10;8!UBERON:0004211;1.72e-08;10!UBERON:0009773;1.72e-08;10!UBERON:0001231;1.72e-08;10!UBERON:0004810;1.72e-08;10!UBERON:0005631;2.01e-08;10!UBERON:0000158;2.01e-08;10!UBERON:0001225;3.76e-07;12!UBERON:0008987;3.76e-07;12!UBERON:0010371;4.56e-07;31!UBERON:0000486;4.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.07e-27,3;UBERON:0007685,5.07e-27,3;UBERON:0004134,5.07e-27,3;UBERON:0001949,7.22e-27,3;UBERON:0000920,1.05e-12,3;UBERON:0003350,1.90e-10,8;UBERON:0001828,1.90e-10,8;UBERON:0004810,1.68e-08,10;UBERON:0001225,3.68e-07,12;UBERON:0008987,3.68e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.61560529038394,1.02000345622126,0.940364164434263,0.286235987131057,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,1.35282597214308,1.63647672354501,2.00763216772303,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441175890929576,0.871517776369625,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,0.804231779293047,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.335964256397719,0.992425680696705,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,2.03901018436031,2.49322802678617,1.34324852833307,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.768760269460425,4.21121951232128,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.344743373241465,1.16641845353302,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,1.27600463892768,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.0967563312890851,0,0,0.290967049465258,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,3.60136994970374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,1.54400723580486,1.31570429747224,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.177404740325278,0,3.08678416987353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.61560529038394,1.02000345622126,0.940364164434263,0.286235987131057,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,1.35282597214308,1.63647672354501,2.00763216772303,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441175890929576,0.871517776369625,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,1.1240175325762,0.804231779293047,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.335964256397719,0.992425680696705,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,2.03901018436031,2.49322802678617,1.34324852833307,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.768760269460425,4.21121951232128,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0.613612095012929,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.344743373241465,1.16641845353302,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,1.27600463892768,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.0967563312890851,0,0,0.290967049465258,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,3.60136994970374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,1.54400723580486,1.31570429747224,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0.177404740325278,0,3.08678416987353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:17519128..17519138,+ | |||
}} | }} |
Latest revision as of 00:40, 28 July 2015
Short description: | p@chr1:17519128..17519138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:17519128..17519138, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.07e-27 | 3 |
kidney cortex tubule cell | 5.07e-27 | 3 |
epithelial cell of proximal tubule | 5.07e-27 | 3 |
gingival epithelial cell | 7.22e-27 | 3 |
chorionic membrane mesenchymal stem cell | 1.05e-12 | 3 |
kidney tubule cell | 1.68e-08 | 10 |
nephron tubule epithelial cell | 1.68e-08 | 10 |
kidney cortical cell | 3.68e-07 | 12 |
renal cortical epithelial cell | 3.68e-07 | 12 |
endo-epithelial cell | 4.10e-07 | 42 |
epithelial cell | 4.46e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 5.07e-27 | 3 |
region of nephron tubule | 5.07e-27 | 3 |
proximal tubule | 5.07e-27 | 3 |
gingival epithelium | 7.22e-27 | 3 |
egg chorion | 1.05e-12 | 3 |
epithelium of mucosa | 1.90e-10 | 8 |
gingiva | 1.90e-10 | 8 |
nephron tubule epithelium | 1.68e-08 | 10 |
cortex of kidney | 3.68e-07 | 12 |
renal parenchyma | 3.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.16e-10 | 1 |