FFCP PHASE1:Hg19::chr1:212489954..212489959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:212489954..212489959,+ | |||
|coexpression_cluster_id=C474 | |||
|description=CAGE_peak_at_chr1:212489954..212489959,+ | |description=CAGE_peak_at_chr1:212489954..212489959,+ | ||
|id=chr1:212489954..212489959,+ | |id=chr1:212489954..212489959,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.55e-14!172;CL:0000566!8.55e-14!172;CL:0000988!7.33e-13!182;CL:0002032!1.49e-12!165;CL:0000837!1.49e-12!165;CL:0000738!3.42e-11!140;CL:0002087!5.61e-09!119;CL:0002031!5.96e-08!124;CL:0000542!1.68e-07!53;CL:0000051!1.68e-07!53;CL:0000838!3.57e-07!52 | |ontology_enrichment_celltype=CL:0000037!8.55e-14!172;CL:0000566!8.55e-14!172;CL:0000988!7.33e-13!182;CL:0002032!1.49e-12!165;CL:0000837!1.49e-12!165;CL:0000738!3.42e-11!140;CL:0002087!5.61e-09!119;CL:0002031!5.96e-08!124;CL:0000542!1.68e-07!53;CL:0000051!1.68e-07!53;CL:0000838!3.57e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.88e-09;6!CL:0000791;4.58e-07;18!CL:0000789;4.58e-07;18!CL:0002419;4.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.65e-11,168;CL:0000738,1.04e-10,136;CL:0002393,2.87e-10,9;CL:0002397,2.87e-10,9;CL:0000988,3.10e-10,177;CL:0002032,1.54e-09,161;CL:0000837,1.54e-09,161;CL:0000624,2.90e-09,6;CL:0002087,7.39e-08,115;CL:0000542,1.84e-07,53;CL:0000051,1.84e-07,53;CL:0000791,5.91e-07,18;CL:0000789,5.91e-07,18;CL:0002420,5.91e-07,18;CL:0002419,5.91e-07,18;CL:0000790,5.91e-07,18;CL:0000838,6.23e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;4.58e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.22e-20!115;UBERON:0001049!3.65e-08!57;UBERON:0005068!3.65e-08!57;UBERON:0006241!3.65e-08!57;UBERON:0007135!3.65e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.83e-07;15!UBERON:0000179;2.83e-07;15!UBERON:0000463;2.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.75e-07,114;UBERON:0000178,3.05e-07,15;UBERON:0000179,3.05e-07,15;UBERON:0000463,3.05e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.534893840235659,0.656804715599566,0.314843125254717,0.393364276848904,2.68680578668049,0.309632246632152,0,0,0,0.232401601740905,0.568676929949686,0.587200878669695,2.21598163412751,4.21143339687298,7.16135873362311,0.447830948479849,1.29557466407592,0.515151135268373,1.45398238779565,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0,0,0,0.47296445977717,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0.898893937780338,0.612167784741805,0,0,0,0,0,0.580418477257168,0,0,0.75374599577023,1.0429658368404,0.217188844705117,0.605399502633369,1.47311054395026,0.316462387440884,1.69004229049553,0.637812899895131,1.67726916406701,2.13424399178341,1.05123824989054,0.32145117339416,3.99017841237748,1.59133341759272,2.00930569141097,1.75996244461323,1.09227722252426,1.77901850772711,1.28019066769952,0,0,0,0,0.569212969109448,1.17447437874188,1.14681968437569,0,1.12101712596307,0.526768169550154,6.88484195398416,13.3623659334716,2.05601498999509,1.17030546773475,1.62961133316795,0,0,0.779873198196215,2.06224135232386,2.43687284041983,1.62482318259009,1.66518715643378,1.8208308658383,1.64437904603676,1.38175008892924,1.15921234294021,1.92772532110679,1.60524496853828,2.09071047609954,2.03956816855619,1.53288197440768,0.68725489096526,0.759059076058509,0.318565414324097,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.236777252044017,0.821127996921047,10.8867641341356,10.1627274397733,14.9169135999283,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0.351339142772504,0.851363990735132,0.364295288292542,0,0.97364218096405,0.174129737299267,0.531831842075461,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,1.42306505074684,0.66944122552934,0.402829317109147,0,0,0,0,1.60739510911344,0.673588117878509,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0.436094052142534,0.496971951695318,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0.980771418680752,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.61246251376468,0.61417158655884,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0.206105058476878,0,0,0.675105328965065,0,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,6.33775174109154,0.982827216677626,2.36315962672562,1.7658523976586,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,1.24396869324463,0.576479813667846,1.38866676769018,0.253991577168676,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.358121926479791,1.12085143993527,6.89607660706745,11.4282614675544,12.5776175554153,0.508189248444927,0,0,0.167516265334349,0,3.74503511973591,23.932916736322,0.414415513436035,0,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,1.03384013061444,4.31428401637234,1.28073069364133,0,0,0,0,0.460385919864187,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0.460404944679482,0.114814448164607,0,0.262248829918848,0,0,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0.522870902049801,0,0,0,1.03041011647722,0,0.41254749960294,0,0,1.6068392984416,0,0.616194468458578,0.614014698904518,0,0.322260734604821,0.725083469571143,0.255679882248303,0,0.165284915360978,0,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,1.90585420366231,1.64544909234478,1.29694662238543,2.16012574895246,1.58625035258854,0.213648142254946,0.962479855263359,0,1.30062222588003,0.144269212976445,0.569134746787313,0,0.399158742865633,0.5745161103971,2.32840940996271,0.324621940274555,0.842391534340376,1.82587743226554,0.156679895773023,2.50634477090067,0.169291777801603,0.321176150207399,0.403599414382095,0.851692475380653,0.343505344755765,0,0.223676107892416,0.500547425135725,0.19538809540204,0,0,1.35227839237992,1.99843180798692,0,0.18714054040822,0.586032717087576,0.121360521749513,1.22587722705226,0,0.71623345421307,0,0,0.994147647766298,0.844016498463076,0.556543525114529,0.824019371133798,1.90012867315194,1.19548792950642,1.10513566212459,1.76352923497993,0.102268682502155,0.369254416383208,0,0.359473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| ||
|short_description=p@chr1:212489954..212489959,+ | |short_description=p@chr1:212489954..212489959,+ | ||
}} | }} |
Latest revision as of 03:36, 28 July 2015
Short description: | p@chr1:212489954..212489959, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:212489954..212489959, + |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.65e-11 | 168 |
leukocyte | 1.04e-10 | 136 |
intermediate monocyte | 2.87e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.87e-10 | 9 |
hematopoietic cell | 3.10e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.54e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-09 | 161 |
CD4-positive, alpha-beta T cell | 2.90e-09 | 6 |
nongranular leukocyte | 7.39e-08 | 115 |
lymphocyte | 1.84e-07 | 53 |
common lymphoid progenitor | 1.84e-07 | 53 |
mature alpha-beta T cell | 5.91e-07 | 18 |
alpha-beta T cell | 5.91e-07 | 18 |
immature T cell | 5.91e-07 | 18 |
mature T cell | 5.91e-07 | 18 |
immature alpha-beta T cell | 5.91e-07 | 18 |
lymphoid lineage restricted progenitor cell | 6.23e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.75e-07 | 114 |
blood | 3.05e-07 | 15 |
haemolymphatic fluid | 3.05e-07 | 15 |
organism substance | 3.05e-07 | 15 |