FFCP PHASE1:Hg19::chr1:246023808..246023820,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246023808..246023820,- | |||
|description=CAGE_peak_at_chr1:246023808..246023820,- | |description=CAGE_peak_at_chr1:246023808..246023820,- | ||
|id=chr1:246023808..246023820,- | |id=chr1:246023808..246023820,- | ||
|ontology_enrichment_celltype=CL:0002334!1.29e-19!12;CL:0000048!3.31e-13!430;CL:0000723!8.91e-13!436;CL:0000136!2.43e-12!15;CL:0000034!3.19e-12!444;CL:0000055!1.70e-10!180;CL:0000057!2.76e-09!75;CL:0002579!9.34e-09!3;CL:0002504!1.14e-08!3;CL:1000279!1.14e-08!3;CL:1000280!1.14e-08!3;CL:0002615!1.29e-08!3;CL:0002580!2.83e-08!3;CL:0002570!5.21e-08!8;CL:0002371!1.23e-07!591;CL:0000134!1.47e-07!358;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0002320!3.66e-07!365;CL:0000187!4.36e-07!54;CL:0002622!7.52e-07!3 | |ontology_enrichment_celltype=CL:0002334!1.29e-19!12;CL:0000048!3.31e-13!430;CL:0000723!8.91e-13!436;CL:0000136!2.43e-12!15;CL:0000034!3.19e-12!444;CL:0000055!1.70e-10!180;CL:0000057!2.76e-09!75;CL:0002579!9.34e-09!3;CL:0002504!1.14e-08!3;CL:1000279!1.14e-08!3;CL:1000280!1.14e-08!3;CL:0002615!1.29e-08!3;CL:0002580!2.83e-08!3;CL:0002570!5.21e-08!8;CL:0002371!1.23e-07!591;CL:0000134!1.47e-07!358;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0002320!3.66e-07!365;CL:0000187!4.36e-07!54;CL:0002622!7.52e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.27e-23;12!CL:0002579;1.97e-18;3!CL:0002615;2.42e-18;3!CL:0002504;3.06e-18;3!CL:1000279;3.06e-18;3!CL:1000280;3.06e-18;3!CL:0002570;7.67e-18;8!CL:0000136;9.60e-16;13!CL:0002569;3.50e-09;6!CL:0002580;1.14e-08;3!CL:0000034;1.24e-07;69!CL:0002568;1.97e-07;1!CL:0002616;6.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.45e-23,15;CL:0002334,3.92e-23,12;CL:0002579,1.76e-18,3;CL:0002504,2.81e-18,3;CL:1000279,2.81e-18,3;CL:1000280,2.81e-18,3;CL:0002615,3.77e-18,3;CL:0002570,5.89e-18,8;CL:0000048,1.62e-09,427;CL:0000723,2.69e-09,433;CL:0002569,3.04e-09,6;CL:0000034,5.18e-09,441;CL:0002580,1.24e-08,3;CL:0002568,1.98e-07,1;CL:0002616,4.57e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.27e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.11e-15!6;UBERON:0002358!1.11e-15!6;UBERON:0003684!1.11e-15!6;UBERON:0001178!1.11e-15!6;UBERON:0001013!3.29e-08!14;UBERON:0002384!1.22e-07!375;UBERON:0004457!2.27e-07!12;UBERON:0000042!2.27e-07!12 | |ontology_enrichment_uberon=UBERON:0003688!1.11e-15!6;UBERON:0002358!1.11e-15!6;UBERON:0003684!1.11e-15!6;UBERON:0001178!1.11e-15!6;UBERON:0001013!3.29e-08!14;UBERON:0002384!1.22e-07!375;UBERON:0004457!2.27e-07!12;UBERON:0000042!2.27e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.62e-35;6!UBERON:0002358;5.62e-35;6!UBERON:0003684;5.62e-35;6!UBERON:0001178;5.62e-35;6!UBERON:0004457;3.70e-23;9!UBERON:0000042;3.70e-23;9!UBERON:0001013;3.01e-19;14!UBERON:0003422;3.50e-09;6!UBERON:0003104;6.20e-08;7!UBERON:0009142;6.20e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.80e-35,6;UBERON:0002358,7.80e-35,6;UBERON:0003684,7.80e-35,6;UBERON:0001178,7.80e-35,6;UBERON:0001013,1.95e-19,14;UBERON:0004457,3.62e-17,12;UBERON:0000042,3.62e-17,12;UBERON:0003422,3.04e-09,6 | |||
|phase1_expression=4.1786027232228,0.428201047781966,8.03440103347036,1.0007329835313,3.5756887554183,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0,0,1.01254888506529,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39523833576444,0,0,1.06375246633948,0,0,0,0,0.714889968290738,1.62786481617433,0,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.356857977594324,0,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,3.2254015016441,0.767309866440312,1.40330047216537,8.84160129864337,1.53512174720011,4.50390979202101,0,0.771048469013278,3.55123450626254,1.97105174433142,0,0.697262270759755,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07420244868274,0.145016693914229,0,1.78064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0.318203247925937,0,2.87795932133304,2.47083326762449,2.12062324222236,0.404364963146632,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0.286822704408103,1.27723753317057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,14.0227985908335,2.21922344601045,0.189403005275089,0,0,0,0.604923695052956,0.466311601748341,0,0.477890301491107,0,0.310525913752519,0,14.0896108715737,2.08698024724694,0.150257608997218,0,0.813741466409323,3.27327586564607,0.214821114084977,0,0,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=4.1786027232228,0.428201047781966,8.03440103347036,1.0007329835313,3.5756887554183,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0,0,1.01254888506529,0,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39523833576444,0,0,1.06375246633948,0,0,0,0,0.714889968290738,1.62786481617433,0,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.356857977594324,0,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0,0,0,0,0,3.2254015016441,0.767309866440312,1.40330047216537,8.84160129864337,1.53512174720011,4.50390979202101,0,0.771048469013278,3.55123450626254,1.97105174433142,0,0.697262270759755,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07420244868274,0.145016693914229,0,1.78064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0.42793898803392,0.318203247925937,0,2.87795932133304,2.47083326762449,2.12062324222236,0.404364963146632,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0.286822704408103,1.27723753317057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,14.0227985908335,2.21922344601045,0.189403005275089,0,0,0,0.604923695052956,0.466311601748341,0,0.477890301491107,0,0.310525913752519,0,14.0896108715737,2.08698024724694,0.150257608997218,0,0.813741466409323,3.27327586564607,0.214821114084977,0,0,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:246023808..246023820,- | |short_description=p@chr1:246023808..246023820,- | ||
}} | }} |
Latest revision as of 06:03, 28 July 2015
Short description: | p@chr1:246023808..246023820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246023808..246023820, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.45e-23 | 15 |
preadipocyte | 3.92e-23 | 12 |
omentum preadipocyte | 1.76e-18 | 3 |
enteric smooth muscle cell | 2.81e-18 | 3 |
smooth muscle cell of large intestine | 2.81e-18 | 3 |
smooth muscle cell of colon | 2.81e-18 | 3 |
adipocyte of omentum tissue | 3.77e-18 | 3 |
mesenchymal stem cell of adipose | 5.89e-18 | 8 |
multi fate stem cell | 1.62e-09 | 427 |
somatic stem cell | 2.69e-09 | 433 |
mesenchymal stem cell of umbilical cord | 3.04e-09 | 6 |
stem cell | 5.18e-09 | 441 |
preadipocyte of the breast | 1.24e-08 | 3 |
mesenchymal stem cell of Wharton's jelly | 1.98e-07 | 1 |
perirenal adipocyte cell | 4.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.80e-35 | 6 |
peritoneum | 7.80e-35 | 6 |
abdominal cavity | 7.80e-35 | 6 |
visceral peritoneum | 7.80e-35 | 6 |
adipose tissue | 1.95e-19 | 14 |
cavity lining | 3.62e-17 | 12 |
serous membrane | 3.62e-17 | 12 |
mesenchyme of umbilical cord | 3.04e-09 | 6 |