FFCP PHASE1:Hg19::chr1:52940616..52940641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:52940616..52940641,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr1:52940616..52940641,- | |description=CAGE_peak_at_chr1:52940616..52940641,- | ||
|id=chr1:52940616..52940641,- | |id=chr1:52940616..52940641,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;7.62e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.19e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.12e-11!41;UBERON:0001890!3.12e-11!41;UBERON:0006240!3.12e-11!41;UBERON:0003080!8.52e-11!42;UBERON:0007023!1.97e-10!115;UBERON:0001049!2.29e-10!57;UBERON:0005068!2.29e-10!57;UBERON:0006241!2.29e-10!57;UBERON:0007135!2.29e-10!57;UBERON:0001017!1.78e-09!82;UBERON:0001950!1.93e-09!20;UBERON:0005743!2.00e-09!86;UBERON:0002346!3.64e-09!90;UBERON:0002616!6.99e-09!59;UBERON:0000955!7.37e-09!69;UBERON:0006238!7.37e-09!69;UBERON:0003056!2.43e-08!61;UBERON:0002619!2.97e-08!22;UBERON:0000073!4.05e-08!94;UBERON:0001016!4.05e-08!94;UBERON:0001893!4.86e-08!34;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0002791!1.30e-07!33;UBERON:0002020!3.81e-07!34;UBERON:0003528!3.81e-07!34;UBERON:0001869!6.94e-07!32;UBERON:0000956!7.74e-07!25;UBERON:0000203!7.74e-07!25 | |ontology_enrichment_uberon=UBERON:0002780!3.12e-11!41;UBERON:0001890!3.12e-11!41;UBERON:0006240!3.12e-11!41;UBERON:0003080!8.52e-11!42;UBERON:0007023!1.97e-10!115;UBERON:0001049!2.29e-10!57;UBERON:0005068!2.29e-10!57;UBERON:0006241!2.29e-10!57;UBERON:0007135!2.29e-10!57;UBERON:0001017!1.78e-09!82;UBERON:0001950!1.93e-09!20;UBERON:0005743!2.00e-09!86;UBERON:0002346!3.64e-09!90;UBERON:0002616!6.99e-09!59;UBERON:0000955!7.37e-09!69;UBERON:0006238!7.37e-09!69;UBERON:0003056!2.43e-08!61;UBERON:0002619!2.97e-08!22;UBERON:0000073!4.05e-08!94;UBERON:0001016!4.05e-08!94;UBERON:0001893!4.86e-08!34;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0002791!1.30e-07!33;UBERON:0002020!3.81e-07!34;UBERON:0003528!3.81e-07!34;UBERON:0001869!6.94e-07!32;UBERON:0000956!7.74e-07!25;UBERON:0000203!7.74e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0000078;1.21e-13;2!UBERON:0002012;1.21e-13;2!UBERON:0008886;1.21e-13;2!UBERON:0002368;5.61e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0004145,1.67e-09,3;UBERON:0002368,4.39e-07,35 | |||
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| ||
|short_description=p@chr1:52940616..52940641,- | |short_description=p@chr1:52940616..52940641,- | ||
}} | }} |
Latest revision as of 09:05, 28 July 2015
Short description: | p@chr1:52940616..52940641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:52940616..52940641, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.37e-13 | 2 |
developing epithelial placode | 1.37e-13 | 2 |
respiratory system arterial blood vessel | 1.37e-13 | 2 |
respiratory system blood vessel | 1.37e-13 | 2 |
respiratory system artery | 1.37e-13 | 2 |
head blood vessel | 1.37e-13 | 2 |
pulmonary artery | 1.37e-13 | 2 |
pulmonary vascular system | 1.37e-13 | 2 |
pharyngeal vasculature | 1.37e-13 | 2 |
truncus arteriosus | 1.37e-13 | 2 |
aortic sac | 1.37e-13 | 2 |
pharyngeal arch artery | 1.37e-13 | 2 |
outflow tract | 1.67e-09 | 3 |
endocrine gland | 4.39e-07 | 35 |