FFCP PHASE1:Hg19::chr1:859450..859476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:859450..859476,+ | |||
|coexpression_cluster_id=C2602 | |||
|description=CAGE_peak_at_chr1:859450..859476,+ | |description=CAGE_peak_at_chr1:859450..859476,+ | ||
|id=chr1:859450..859476,+ | |id=chr1:859450..859476,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.08e-08;12!CL:0002615;1.20e-07;3!CL:0002580;5.20e-07;3!CL:0002579;9.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.25e-08,15;CL:0002334,7.91e-08,12;CL:0002615,1.43e-07,3;CL:0002580,4.34e-07,3;CL:0000057,7.88e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.16e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.31e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.89e-13;6!UBERON:0002358;9.89e-13;6!UBERON:0003684;9.89e-13;6!UBERON:0001178;9.89e-13;6!UBERON:0004457;5.10e-11;9!UBERON:0000042;5.10e-11;9!UBERON:0000310;2.11e-09;10!UBERON:0001443;1.94e-08;11!UBERON:0000966;3.88e-07;5!UBERON:0005388;3.88e-07;5!UBERON:0001802;3.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.34e-12,6;UBERON:0002358,1.34e-12,6;UBERON:0003684,1.34e-12,6;UBERON:0001178,1.34e-12,6;UBERON:0000310,2.13e-09,10;UBERON:0001443,1.95e-08,11;UBERON:0004457,6.54e-08,12;UBERON:0000042,6.54e-08,12 | |||
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| ||
|short_description=p@chr1:859450..859476,+ | |short_description=p@chr1:859450..859476,+ | ||
}} | }} |
Latest revision as of 10:50, 28 July 2015
Short description: | p@chr1:859450..859476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:859450..859476, + |
Coexpression cluster: | C2602_Fibroblast_merkel_neuroectodermal_neuroepithelioma_Retinal_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.25e-08 | 15 |
preadipocyte | 7.91e-08 | 12 |
adipocyte of omentum tissue | 1.43e-07 | 3 |
preadipocyte of the breast | 4.34e-07 | 3 |
fibroblast | 7.88e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.34e-12 | 6 |
peritoneum | 1.34e-12 | 6 |
abdominal cavity | 1.34e-12 | 6 |
visceral peritoneum | 1.34e-12 | 6 |
breast | 2.13e-09 | 10 |
chest | 1.95e-08 | 11 |
cavity lining | 6.54e-08 | 12 |
serous membrane | 6.54e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.31e-07 | 10 |