FFCP PHASE1:Hg19::chr1:85991364..85991367,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:85991364..85991367,- to FFCP PHASE1:Hg19::chr1:85991364..85991367,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:85991364..85991367,- | |||
|description=CAGE_peak_at_chr1:85991364..85991367,- | |||
|id=chr1:85991364..85991367,- | |||
|ontology_enrichment_celltype=CL:0002620!4.35e-19!23;CL:0000057!7.52e-15!75;CL:0000055!7.85e-13!180;CL:0000569!2.09e-11!4;CL:0000011!2.09e-11!4;CL:1000306!3.36e-11!4;CL:0002547!3.36e-11!4;CL:0002551!5.28e-11!6;CL:0000048!3.22e-07!430;CL:0000723!6.22e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:1000306;9.22e-26;4!CL:0002547;9.22e-26;4!CL:0002561;1.14e-13;2!CL:0000569;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,9.82e-26,4;CL:0002547,9.82e-26,4;CL:0002561,1.07e-13,2;CL:0000569,2.04e-07,4;CL:0000011,2.04e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.75e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!3.36e-11!4;UBERON:0007240!3.36e-11!4;UBERON:0005742!3.36e-11!4;UBERON:0005734!3.36e-11!4;UBERON:0004664!3.36e-11!4;UBERON:0004663!3.36e-11!4;UBERON:0002097!1.72e-09!40;UBERON:0002199!2.40e-09!45;UBERON:0002416!2.40e-09!45;UBERON:0000914!3.93e-08!83;UBERON:0002329!3.93e-08!83;UBERON:0003077!3.93e-08!83;UBERON:0003059!3.93e-08!83;UBERON:0007282!3.93e-08!83;UBERON:0009618!3.93e-08!83;UBERON:0007285!3.93e-08!83;UBERON:0003102!2.43e-07!95;UBERON:0002067!3.44e-07!9;UBERON:0004016!3.44e-07!9;UBERON:0010083!3.44e-07!9;UBERON:0002119!4.73e-07!4;UBERON:0004531!4.73e-07!4;UBERON:0002384!9.62e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.22e-26;4!UBERON:0000415;9.22e-26;4!UBERON:0007240;9.22e-26;4!UBERON:0005742;9.22e-26;4!UBERON:0005734;9.22e-26;4!UBERON:0004664;9.22e-26;4!UBERON:0004663;9.22e-26;4!UBERON:0005933;1.14e-13;2!UBERON:0005942;1.14e-13;2!UBERON:0005932;1.14e-13;2!UBERON:0000947;2.15e-11;21!UBERON:0010191;2.15e-11;21!UBERON:0004573;2.21e-07;33!UBERON:0004571;2.21e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.82e-26,4;UBERON:0007240,9.82e-26,4;UBERON:0005742,9.82e-26,4;UBERON:0005734,9.82e-26,4;UBERON:0004664,9.82e-26,4;UBERON:0004663,9.82e-26,4;UBERON:0004797,3.53e-15,7;UBERON:0005933,1.07e-13,2;UBERON:0005942,1.07e-13,2;UBERON:0005932,1.07e-13,2;UBERON:0000947,2.18e-11,21;UBERON:0010191,2.18e-11,21;UBERON:0004573,1.77e-07,33;UBERON:0004571,1.77e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.04541115870403,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0.485618833104395,0.842704840213491,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0.89694817844431,0,0,0.600182192168805,0,0,0,1.68776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0.413509717453592,0.214840489736547,0,0,0,0,0,0,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0.907385542579434,0.466311601748341,1.03498604992744,0.955780602982214,0,0.621051827505038,0.829412415681711,0,0,0.450772826991655,0,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.04541115870403,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.469737994575059,0.485618833104395,0.842704840213491,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0,0,0.89694817844431,0,0,0.600182192168805,0,0,0,1.68776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.328508624055237,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0.413509717453592,0.214840489736547,0,0,0,0,0,0,0,0,4.09256050879832,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0.907385542579434,0.466311601748341,1.03498604992744,0.955780602982214,0,0.621051827505038,0.829412415681711,0,0,0.450772826991655,0,0.813741466409323,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:85991364..85991367,- | |||
}} | }} |
Latest revision as of 10:51, 28 July 2015
Short description: | p@chr1:85991364..85991367, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:85991364..85991367, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 9.82e-26 | 4 |
fibroblast of the aortic adventitia | 9.82e-26 | 4 |
outer root sheath cell | 1.07e-13 | 2 |
cardiac mesenchymal cell | 2.04e-07 | 4 |
migratory trunk neural crest cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.82e-26 | 4 |
tunica adventitia of artery | 9.82e-26 | 4 |
adventitia | 9.82e-26 | 4 |
tunica adventitia of blood vessel | 9.82e-26 | 4 |
aorta tunica adventitia | 9.82e-26 | 4 |
aorta wall | 9.82e-26 | 4 |
blood vessel layer | 3.53e-15 | 7 |
hair root sheath | 1.07e-13 | 2 |
hair outer root sheath | 1.07e-13 | 2 |
bulb of hair follicle | 1.07e-13 | 2 |
aorta | 2.18e-11 | 21 |
aortic system | 2.18e-11 | 21 |
systemic artery | 1.77e-07 | 33 |
systemic arterial system | 1.77e-07 | 33 |