FFCP PHASE1:Hg19::chr1:94790959..94790968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94790959..94790968,- | |||
|description=CAGE_peak_at_chr1:94790959..94790968,- | |description=CAGE_peak_at_chr1:94790959..94790968,- | ||
|id=chr1:94790959..94790968,- | |id=chr1:94790959..94790968,- | ||
|ontology_enrichment_celltype=CL:0000066!9.70e-33!254;CL:0000076!3.72e-23!62;CL:0000220!1.36e-15!246;CL:0002321!2.70e-15!248;CL:0000071!1.52e-14!18;CL:0002546!1.52e-14!18;CL:0002139!3.67e-13!24;CL:0000213!6.50e-12!57;CL:0000215!6.50e-12!57;CL:0002078!4.25e-10!44;CL:0000548!5.83e-09!679;CL:0000004!5.83e-09!679;CL:0000255!5.83e-09!679;CL:0000012!9.16e-09!682;CL:0000115!1.03e-08!35;CL:0000223!1.55e-08!59;CL:0002076!2.29e-08!43;CL:0002368!4.37e-08!13;CL:1000413!5.67e-08!9;CL:0000222!1.30e-07!119;CL:0000063!3.60e-07!578 | |ontology_enrichment_celltype=CL:0000066!9.70e-33!254;CL:0000076!3.72e-23!62;CL:0000220!1.36e-15!246;CL:0002321!2.70e-15!248;CL:0000071!1.52e-14!18;CL:0002546!1.52e-14!18;CL:0002139!3.67e-13!24;CL:0000213!6.50e-12!57;CL:0000215!6.50e-12!57;CL:0002078!4.25e-10!44;CL:0000548!5.83e-09!679;CL:0000004!5.83e-09!679;CL:0000255!5.83e-09!679;CL:0000012!9.16e-09!682;CL:0000115!1.03e-08!35;CL:0000223!1.55e-08!59;CL:0002076!2.29e-08!43;CL:0002368!4.37e-08!13;CL:1000413!5.67e-08!9;CL:0000222!1.30e-07!119;CL:0000063!3.60e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.93e-15;6!CL:0002255;1.93e-15;6!CL:0000319;2.96e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.93e-15,6;CL:0002255,1.93e-15,6;CL:0000319,3.28e-11,1;CL:0000066,3.34e-10,253;CL:0002076,4.16e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.98e-14;3!UBERON:0003353;1.98e-14;3!UBERON:0007123;4.67e-09;5 | |||
|ontology_enrichment_disease=DOID:305!3.15e-13!106;DOID:0050687!3.34e-13!143;DOID:162!6.54e-08!235;DOID:1749!1.35e-07!14;DOID:14566!1.94e-07!239 | |ontology_enrichment_disease=DOID:305!3.15e-13!106;DOID:0050687!3.34e-13!143;DOID:162!6.54e-08!235;DOID:1749!1.35e-07!14;DOID:14566!1.94e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.93e-15;6!DOID:299;4.73e-14;25!DOID:3112;9.55e-12;1!DOID:3030;2.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.93e-15,6;DOID:299,4.74e-14,25;DOID:305,8.10e-12,106;DOID:3112,9.57e-12,1;DOID:3030,3.28e-11,1;DOID:0050687,2.82e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000487!3.07e-15!22;UBERON:0001986!1.52e-14!18;UBERON:0004638!1.52e-14!18;UBERON:0004852!1.52e-14!18;UBERON:0006914!8.36e-13!25;UBERON:0000119!2.61e-10!312;UBERON:0000483!3.77e-10!309;UBERON:0005153!2.69e-09!37;UBERON:0000490!9.27e-09!138;UBERON:0003915!5.67e-08!9;UBERON:0004700!5.67e-08!9;UBERON:0001917!5.67e-08!9;UBERON:0005157!7.05e-08!51;UBERON:0003914!3.13e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.67e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.49e-09,5;UBERON:0004117,5.49e-09,5;UBERON:0007689,5.49e-09,5;UBERON:0007123,5.49e-09,5;UBERON:0003091,5.49e-09,5;UBERON:0000995,8.26e-08,21;UBERON:0005795,1.84e-07,22;UBERON:0003975,1.84e-07,22 | |||
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| ||
|short_description=p@chr1:94790959..94790968,- | |short_description=p@chr1:94790959..94790968,- | ||
}} | }} |
Latest revision as of 11:31, 28 July 2015
Short description: | p@chr1:94790959..94790968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94790959..94790968, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.93e-15 | 6 |
stromal cell of endometrium | 1.93e-15 | 6 |
mucus secreting cell | 3.28e-11 | 1 |
epithelial cell | 3.34e-10 | 253 |
endo-epithelial cell | 4.16e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 5.49e-09 | 5 |
pharyngeal pouch | 5.49e-09 | 5 |
thyroid diverticulum | 5.49e-09 | 5 |
pharyngeal pouch 2 | 5.49e-09 | 5 |
thyroid primordium | 5.49e-09 | 5 |
uterus | 8.26e-08 | 21 |
embryonic uterus | 1.84e-07 | 22 |
internal female genitalia | 1.84e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.93e-15 | 6 |
adenocarcinoma | 4.74e-14 | 25 |
carcinoma | 8.10e-12 | 106 |
papillary adenocarcinoma | 9.57e-12 | 1 |
mucinous adenocarcinoma | 3.28e-11 | 1 |
cell type cancer | 2.82e-08 | 143 |