FFCP PHASE1:Hg19::chr20:10619777..10619811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:10619777..10619811,- | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_at_chr20:10619777..10619811,- | |description=CAGE_peak_at_chr20:10619777..10619811,- | ||
|id=chr20:10619777..10619811,- | |id=chr20:10619777..10619811,- | ||
|ontology_enrichment_celltype=CL:0000066!7.73e-15!254;CL:0002076!3.07e-12!43;CL:0000223!1.08e-09!59 | |ontology_enrichment_celltype=CL:0000066!7.73e-15!254;CL:0002076!3.07e-12!43;CL:0000223!1.08e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.16e-13;42!CL:0002621;1.22e-12;3!CL:0002368;4.98e-11;13!CL:0002149;8.63e-07;6!CL:0002255;8.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.85e-15,42;CL:0002621,1.68e-12,3;CL:0002368,4.92e-11,13;CL:0000223,7.63e-11,58;CL:0002149,8.89e-07,6;CL:0002255,8.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;6.37e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!3.08e-11!143;DOID:305!7.48e-10!106;DOID:1749!1.60e-07!14 | |ontology_enrichment_disease=DOID:0050687!3.08e-11!143;DOID:305!7.48e-10!106;DOID:1749!1.60e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3111;6.32e-10;1!DOID:3603;6.32e-10;1!DOID:3001;8.63e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.30e-10,1;DOID:3603,5.30e-10,1;DOID:3001,8.89e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.22e-12;3!UBERON:0002426;6.32e-10;1!UBERON:0003831;6.32e-10;1!UBERON:0003898;6.32e-10;1!UBERON:0004830;6.32e-10;1!UBERON:0003830;6.32e-10;1!UBERON:0005175;6.32e-10;1!UBERON:0001774;6.32e-10;1!UBERON:0001103;6.32e-10;1!UBERON:0000486;4.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.68e-12,3;UBERON:0002426,4.06e-10,1;UBERON:0003831,4.06e-10,1;UBERON:0003898,4.06e-10,1;UBERON:0004830,4.06e-10,1;UBERON:0003830,4.06e-10,1;UBERON:0005175,4.06e-10,1;UBERON:0001774,4.06e-10,1;UBERON:0001103,4.06e-10,1;UBERON:0010084,4.06e-10,1 | |||
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| ||
|short_description=p@chr20:10619777..10619811,- | |short_description=p@chr20:10619777..10619811,- | ||
}} | }} |
Latest revision as of 11:53, 28 July 2015
Short description: | p@chr20:10619777..10619811, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10619777..10619811, - |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.85e-15 | 42 |
gingival epithelial cell | 1.68e-12 | 3 |
respiratory epithelial cell | 4.92e-11 | 13 |
endodermal cell | 7.63e-11 | 58 |
epithelial cell of uterus | 8.89e-07 | 6 |
stromal cell of endometrium | 8.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.68e-12 | 3 |
chest muscle | 4.06e-10 | 1 |
respiratory system muscle | 4.06e-10 | 1 |
skeletal muscle of trunk | 4.06e-10 | 1 |
respiratory system skeletal muscle | 4.06e-10 | 1 |
thoracic segment muscle | 4.06e-10 | 1 |
chest organ | 4.06e-10 | 1 |
muscle of trunk | 4.06e-10 | 1 |
diaphragm | 4.06e-10 | 1 |
future diaphragm | 4.06e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.30e-10 | 1 |
mucinous cystadenocarcinoma | 5.30e-10 | 1 |
female reproductive endometrioid cancer | 8.89e-07 | 6 |