FFCP PHASE1:Hg19::chr20:42780550..42780563,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:42780550..42780563,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_at_chr20:42780550..42780563,+ | |description=CAGE_peak_at_chr20:42780550..42780563,+ | ||
|id=chr20:42780550..42780563,+ | |id=chr20:42780550..42780563,+ | ||
|ontology_enrichment_celltype=CL:0000039;1.93e-51;7!CL:0000586;1.93e-51;7!CL:0000083;4.94e-40;4 | |ontology_enrichment_celltype=CL:0002541!2.00e-17!3;CL:0000039!3.30e-13!7;CL:0000586!3.30e-13!7;CL:0002251!1.19e-08!21;CL:0000076!1.66e-08!62;CL:0000223!1.92e-07!59;CL:0002076!8.09e-07!43;CL:0000083!9.81e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.93e-51;7!CL:0000586;1.93e-51;7!CL:0000083;4.94e-40;4 | ||
|ontology_enrichment_disease=DOID:1799;2.21e-40;1!DOID:10165;2.21e-40;1!DOID:1798;2.21e-40;1!DOID:1793;4.94e-40;4!DOID:170;4.06e-27;6!DOID:4074;6.96e-21;2!DOID:4905;6.96e-21;2!DOID:3498;6.96e-21;2!DOID:3095;4.60e-17;22!DOID:2994;4.60e-17;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.93e-51,7;CL:0000586,1.93e-51,7;CL:0000083,4.94e-40,4 | ||
|ontology_enrichment_uberon=UBERON:0001264;9.54e-17;10!UBERON:0002075;8.86e-10;18 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.78e-23!14;DOID:0050687!3.24e-12!143;DOID:162!3.42e-11!235;DOID:305!4.92e-11!106;DOID:14566!7.66e-11!239;DOID:4362!5.14e-10!5;DOID:170!4.37e-09!6;DOID:1799!3.52e-07!1;DOID:10165!3.52e-07!1;DOID:1798!3.52e-07!1;DOID:3151!4.18e-07!1;DOID:3149!4.18e-07!1;DOID:1793!9.81e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.21e-40;1!DOID:10165;2.21e-40;1!DOID:1798;2.21e-40;1!DOID:1793;4.94e-40;4!DOID:170;4.06e-27;6!DOID:4074;6.96e-21;2!DOID:4905;6.96e-21;2!DOID:3498;6.96e-21;2!DOID:3095;4.60e-17;22!DOID:2994;4.60e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.21e-40,1;DOID:10165,2.21e-40,1;DOID:1798,2.21e-40,1;DOID:1793,4.94e-40,4;DOID:170,4.06e-27,6;DOID:4074,6.96e-21,2;DOID:4905,6.96e-21,2;DOID:3498,6.96e-21,2;DOID:3095,4.60e-17,22;DOID:2994,4.60e-17,22;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003124!1.86e-19!7;UBERON:0005631!2.25e-18!14;UBERON:0000158!2.25e-18!14;UBERON:0000476!2.00e-17!3;UBERON:0000920!2.00e-17!3;UBERON:0003343!1.39e-12!4;UBERON:0004785!1.39e-12!4;UBERON:0004923!2.53e-11!57;UBERON:0000344!4.89e-11!12;UBERON:0000478!2.40e-10!24;UBERON:0003729!3.63e-10!5;UBERON:0000995!1.45e-08!21;UBERON:0000002!2.00e-08!6;UBERON:0001560!2.00e-08!6;UBERON:0005795!3.76e-08!22;UBERON:0003975!3.76e-08!22;UBERON:0000997!3.95e-07!1;UBERON:0005056!3.95e-07!1;UBERON:0004175!4.17e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;9.54e-17;10!UBERON:0002075;8.86e-10;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,9.54e-17,10;UBERON:0002075,8.86e-10,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,5.07240589653732,5.74448924222542,23.7937744509198,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,5.07240589653732,5.74448924222542,23.7937744509198,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0.174118413160805,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,4.19050711170276,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:42780550..42780563,+ | |short_description=p@chr20:42780550..42780563,+ | ||
}} | }} |
Latest revision as of 14:09, 28 July 2015
Short description: | p@chr20:42780550..42780563, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:42780550..42780563, + |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.93e-51 | 7 |
germ cell | 1.93e-51 | 7 |
epithelial cell of pancreas | 4.94e-40 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.21e-40 | 1 |
endocrine pancreas cancer | 2.21e-40 | 1 |
pancreatic endocrine carcinoma | 2.21e-40 | 1 |
pancreatic cancer | 4.94e-40 | 4 |
endocrine gland cancer | 4.06e-27 | 6 |
pancreas adenocarcinoma | 6.96e-21 | 2 |
pancreatic carcinoma | 6.96e-21 | 2 |
pancreatic ductal adenocarcinoma | 6.96e-21 | 2 |
germ cell and embryonal cancer | 4.60e-17 | 22 |
germ cell cancer | 4.60e-17 | 22 |
cell type cancer | 1.55e-07 | 143 |