FFCP PHASE1:Hg19::chr20:44530935..44530957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:44530935..44530957,- | |||
|description=CAGE_peak_at_chr20:44530935..44530957,- | |||
|id=chr20:44530935..44530957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.81e-11;3!CL:0002575;1.54e-08;2!CL:0002549;1.00e-07;2!CL:0002600;2.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.84e-11,3;CL:0002575,1.56e-08,2;CL:0002549,5.48e-08,2;CL:0002600,3.19e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.40e-10!659;UBERON:0000922!3.52e-09!612;UBERON:0000475!2.48e-08!365;UBERON:0002050!2.57e-08!605;UBERON:0005423!2.57e-08!605;UBERON:0000923!4.98e-08!604;UBERON:0005291!4.98e-08!604;UBERON:0006598!4.98e-08!604;UBERON:0002532!4.98e-08!604;UBERON:0000481!1.20e-07!347;UBERON:0000467!1.24e-07!625;UBERON:0000480!1.64e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.00e-07;2!UBERON:0005358;1.00e-07;2!UBERON:0001886;1.00e-07;2!UBERON:0004086;1.00e-07;2!UBERON:0005282;1.00e-07;2!UBERON:0005281;1.00e-07;2!UBERON:0003126;1.85e-07;7!UBERON:0001005;1.85e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,5.48e-08,2;UBERON:0005358,5.48e-08,2;UBERON:0001886,5.48e-08,2;UBERON:0004086,5.48e-08,2;UBERON:0005282,5.48e-08,2;UBERON:0005281,5.48e-08,2;UBERON:0003126,2.70e-07,7;UBERON:0001005,2.70e-07,7 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,2.23480547213644,0,0,3.79031924056099,2.08948502559871,0,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0.547497700291537,0.376627918784408,0.0764134057479513,0,0,0,0,0,0,1.204823675113,0,0,0,0,0,0,0,4.03047853631864,1.29557466407592,6.95454032612304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0,0.361439152384566,0,0.724232594804119,0,0,0,0.443458794925128,0.175669571386252,0.589405839739707,0.728590576585084,2.59549109949101,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,1.25849830862972,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0.949265659568129,0,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0.74000264525148,0.622422070799533,0.269421344139376,0.163461903113459,1.96764655938411,2.30470369792,0,0,0,0.448346041655403,0.352303495931295,0.485618833104395,0,0,0.368502951935304,0.413303124703062,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.640672166455702,0,0.300091096084402,0,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0,0.969876340912871,0,0.10075209822764,0,0,0,0,0.853815942907168,0.132529768321485,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,4.41026134156626,0,0,0.590789906681404,0,0,0,1.42675371031213,0,0.201057944823262,0.277765335475589,0.325808305310325,0,1.44331342025273,0.231860809950154,0.469634776943287,0,0,0.190254152234598,0,0,0.246217006087397,0,1.48631162288728,0,0.16798212819886,1.41775097242386,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0.126995788584338,0.763976851116555,0,0,0.514137463516618,0.600686115687835,1.14330573052231,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,1.00084595560703,0.542621605391443,0,0,0,0,0.904318131178758,0,0.199945982364114,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0.773288812777695,0.167516265334349,0,0,0,0,1.2269149171914,3.00102312635806,0.271265023699736,0,0.535286966391485,0.315404830067869,0,0.601892199455438,2.27407504055985,1.03473071292505,0,0.184369168541703,0.347534457872331,12.3354729201527,13.7257369524342,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,2.96836132889982,0.308419387605311,0.177561725313127,0,0,0,0.120859449591622,1.40354529212299,0.184161977871793,0.114814448164607,0.546273504020151,1.04899531967539,0,0.15403067420883,0,2.92278449306521,0.422206515571503,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.309123034943167,0,0,1.14853107599234,0.650060246036521,0,0.386682873168488,0.308097234229289,0,0.137836572484531,0.322260734604821,0.290033387828457,0,0.0890320356467374,0.826424576804891,0.768760269460425,0,0.10115778085555,0.929691098594572,1.25924938732256,0,0,0,0,0.18532421910392,0,0.744316738719335,0,0.762520775695299,0.255897791311334,0.855877976067841,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,1.15755106853338,1.31178950409327,0.202910376962704,0.30982349809975,0.563391205064483,0,0.0982490410131212,0.7133421029625,0.354761064070598,0.422215270595328,0.329294892959902,0.379473173765715,0,0.288666338176536,1.34060455107157,1.08890984861323,0.188287601553558,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0,0,0,0.384751292518985,0,0,1.34636466614658,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0.619202951523374,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0.485560759068186,0,1.20990716048664,0,2.27471686662557,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,1.57254001417827,0.171986032471617,0,0,0,0.387956065953678,1.85337866052151,2.25980740780532,0,0,0,0,0,0,0.799238438328521,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0.837847203816763,0.458320848023367,0,0.998395002494955,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,0,0,0.408610218334727,0.803765742325096,0.550157746388935,2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| |||
|short_description=p@chr20:44530935..44530957,- | |||
}} |
Latest revision as of 14:34, 28 July 2015
Short description: | p@chr20:44530935..44530957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44530935..44530957, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.84e-11 | 3 |
central nervous system pericyte | 1.56e-08 | 2 |
fibroblast of choroid plexus | 5.48e-08 | 2 |
smooth muscle cell of trachea | 3.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 5.48e-08 | 2 |
ventricle of nervous system | 5.48e-08 | 2 |
choroid plexus | 5.48e-08 | 2 |
brain ventricle | 5.48e-08 | 2 |
ventricular system of brain | 5.48e-08 | 2 |
ventricular system of central nervous system | 5.48e-08 | 2 |
trachea | 2.70e-07 | 7 |
respiratory airway | 2.70e-07 | 7 |