FFCP PHASE1:Hg19::chr20:47335925..47335955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:47335925..47335955,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr20:47335925..47335955,- | |||
|id=chr20:47335925..47335955,- | |||
|ontology_enrichment_celltype=CL:0000542!2.16e-36!53;CL:0000051!2.16e-36!53;CL:0000838!7.59e-35!52;CL:0000738!1.11e-24!140;CL:0000037!1.48e-23!172;CL:0000566!1.48e-23!172;CL:0002087!3.28e-22!119;CL:0002032!1.49e-21!165;CL:0000837!1.49e-21!165;CL:0000988!1.68e-21!182;CL:0000945!4.59e-21!24;CL:0000826!4.59e-21!24;CL:0002031!2.48e-17!124;CL:0000791!2.19e-11!18;CL:0000789!2.19e-11!18;CL:0002420!2.19e-11!18;CL:0002419!2.19e-11!18;CL:0000790!2.19e-11!18;CL:0000084!5.48e-11!25;CL:0000827!5.48e-11!25;CL:0000767!6.09e-08!3;CL:0000236!1.61e-07!14;CL:0000623!1.81e-07!3;CL:0000825!1.81e-07!3;CL:0000625!2.61e-07!11;CL:0000842!2.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.65e-10;1!CL:0000911;1.65e-10;1!CL:0000814;1.65e-10;1!CL:0002032;7.22e-10;1!CL:0000557;7.22e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.65e-10,1;CL:0000914,1.65e-10,1;CL:0000911,1.65e-10,1;CL:0000814,1.65e-10,1;CL:0002042,1.65e-10,1;CL:0002039,1.65e-10,1;CL:0002040,1.65e-10,1;CL:0002041,1.65e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.22e-10;1!UBERON:0006298;7.22e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;7.22e-10;1!DOID:0050177;7.22e-10;1!DOID:0050427;7.22e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.44e-10,1;DOID:0050177,4.44e-10,1;DOID:0050427,4.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.50e-09!15;UBERON:0000179!2.50e-09!15;UBERON:0000463!2.50e-09!15;UBERON:0004177!3.76e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.07e-14;15!UBERON:0000179;2.07e-14;15!UBERON:0000463;2.07e-14;15!UBERON:0001154;7.22e-10;1!UBERON:0001736;7.22e-10;1!UBERON:0001153;7.22e-10;1!UBERON:0009854;7.22e-10;1!UBERON:0002390;1.55e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.36e-14,15;UBERON:0000179,2.36e-14,15;UBERON:0000463,2.36e-14,15;UBERON:0001736,6.91e-10,1;UBERON:0006298,6.91e-10,1;UBERON:0001154,1.17e-09,1;UBERON:0001153,1.17e-09,1;UBERON:0001045,1.17e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.656804715599566,0.708397031823113,15.3412067971073,0.767658796194425,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0,0.800791974072025,1.14950487990897,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,3.67810289859492,0,0,0,1.44833593950726,0.294605907474837,0.221533894583621,0.541607727530031,1.15282187753108,2.21100890851793,5.09757504271396,6.35605040907451,5.506258628966,0,0,0,3.85251765171725,0.383220493601921,0,0.253019692019503,0.95569624297229,0,0,0.301150238155546,0.76791966692651,0,0.710331756132051,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5554128305242,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,3.0585488285695,1.13929437434833,1.42939065274673,2.05681136543097,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0,0.159426272728822,1.39705560002972,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0.409074730008619,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.845855261818682,0.193373663920732,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.404112318087525,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,1.60284246151616 | ||
|short_description=p@chr20:47335925..47335955,- | |||
}} | }} |
Latest revision as of 14:54, 28 July 2015
Short description: | p@chr20:47335925..47335955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:47335925..47335955, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.65e-10 | 1 |
immature NK T cell | 1.65e-10 | 1 |
effector T cell | 1.65e-10 | 1 |
mature NK T cell | 1.65e-10 | 1 |
immature NK T cell stage IV | 1.65e-10 | 1 |
immature NK T cell stage I | 1.65e-10 | 1 |
immature NK T cell stage II | 1.65e-10 | 1 |
immature NK T cell stage III | 1.65e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.36e-14 | 15 |
haemolymphatic fluid | 2.36e-14 | 15 |
organism substance | 2.36e-14 | 15 |
submandibular gland | 6.91e-10 | 1 |
submandibular gland primordium | 6.91e-10 | 1 |
vermiform appendix | 1.17e-09 | 1 |
caecum | 1.17e-09 | 1 |
midgut | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.44e-10 | 1 |
monogenic disease | 4.44e-10 | 1 |
xeroderma pigmentosum | 4.44e-10 | 1 |