FFCP PHASE1:Hg19::chr20:52570906..52570909,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:52570906..52570909,- | |||
|description=CAGE_peak_at_chr20:52570906..52570909,- | |||
|id=chr20:52570906..52570909,- | |||
|ontology_enrichment_celltype=CL:0002620!2.17e-34!23;CL:0002574!4.91e-11!1;CL:0000057!9.77e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.50e-16;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.44e-16,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.14e-19!5;DOID:450!4.14e-19!5;DOID:66!4.14e-19!5;DOID:423!4.14e-19!5;DOID:0080000!4.14e-19!5;DOID:11722!4.14e-19!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.84e-32;5!DOID:450;1.84e-32;5!DOID:66;1.84e-32;5!DOID:423;1.84e-32;5!DOID:0080000;1.84e-32;5!DOID:11722;1.84e-32;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.70e-32,5;DOID:450,1.70e-32,5;DOID:66,1.70e-32,5;DOID:423,1.70e-32,5;DOID:0080000,1.70e-32,5;DOID:11722,1.70e-32,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.66e-19!40;UBERON:0002199!4.99e-17!45;UBERON:0002416!4.99e-17!45;UBERON:0006834!1.31e-11!1;UBERON:0003102!1.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.70e-40;1!UBERON:0000995;2.52e-10;17!UBERON:0003975;8.29e-10;18!UBERON:0002097;2.24e-09;41!UBERON:0004175;1.50e-08;21!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.30e-40,1;UBERON:0002097,1.56e-09,41;UBERON:0002199,1.40e-08,46;UBERON:0002416,1.40e-08,46;UBERON:0000995,1.53e-08,21;UBERON:0005795,3.39e-08,22;UBERON:0003975,3.39e-08,22;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0004175,2.50e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85422955527427,5.51022943014861,0,1.95799805553034,0.257640540045629,0.37223371266318,0,0,0.252433774244115,6.90374239817245,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15496059865568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1001729976458,0,0,0,0 | |||
|short_description=p@chr20:52570906..52570909,- | |||
}} |
Latest revision as of 15:33, 28 July 2015
Short description: | p@chr20:52570906..52570909, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52570906..52570909, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.44e-16 | 23 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.30e-40 | 1 |
skin of body | 1.56e-09 | 41 |
integument | 1.40e-08 | 46 |
integumental system | 1.40e-08 | 46 |
uterus | 1.53e-08 | 21 |
embryonic uterus | 3.39e-08 | 22 |
internal female genitalia | 3.39e-08 | 22 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
internal genitalia | 2.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.70e-32 | 5 |
myotonic disease | 1.70e-32 | 5 |
muscle tissue disease | 1.70e-32 | 5 |
myopathy | 1.70e-32 | 5 |
muscular disease | 1.70e-32 | 5 |
myotonic dystrophy | 1.70e-32 | 5 |