FFCP PHASE1:Hg19::chr22:26878182..26878233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=89781 | |EntrezGene=entrezgene:89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=15844 | |HGNC=HGNC:15844 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q6P1K3 | |UniProt=uniprot:Q6P1K3 | ||
|association_with_transcript=-64bp_to_BC065030_5end | |association_with_transcript=-64bp_to_BC065030_5end | ||
|cluster_id=chr22:26878182..26878233,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_5_at_HPS4_5end | |description=CAGE_peak_5_at_HPS4_5end |
Revision as of 19:46, 28 July 2015
Short description: | p5@HPS4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HPS4_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -64bp_to_BC065030_5end |
EntrezGene: | 89781 |
HGNC: | 15844 |
UniProt: | Q6P1K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@HPS4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 2.39e-33 | 14 |
macrophage | 5.38e-28 | 6 |
mast cell | 5.46e-24 | 5 |
basophil mast progenitor cell | 5.46e-24 | 5 |
melanocyte | 5.55e-24 | 10 |
melanoblast | 5.55e-24 | 10 |
visual pigment cell | 3.04e-19 | 4 |
light melanocyte | 7.56e-16 | 3 |
adult endothelial progenitor cell | 1.22e-14 | 3 |
retinal pigment epithelial cell | 1.55e-14 | 3 |
Showing 1 to 10 of 24 entries
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.55e-14 | 3 |
presumptive retinal pigmented epithelium | 1.55e-14 | 3 |
retina | 1.39e-12 | 6 |
photoreceptor array | 1.39e-12 | 6 |
posterior segment of eyeball | 1.39e-12 | 6 |
layer of retina | 4.98e-11 | 4 |
bone element | 1.74e-09 | 82 |
bone marrow | 5.21e-09 | 76 |
skeletal element | 2.25e-08 | 90 |
immune system | 5.39e-08 | 93 |
Showing 1 to 10 of 13 entries