FFCP PHASE1:Hg19::chr22:33255792..33255814,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:33255792..33255814,- to FFCP PHASE1:Hg19::chr22:33255792..33255814,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-429bp_to_CU676956_5end | |||
|cluster_id=chr22:33255792..33255814,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_CU676956_5end | |||
|id=chr22:33255792..33255814,- | |||
|ontology_enrichment_celltype=CL:0000055!2.38e-12!180;CL:0000057!1.87e-11!75;CL:0002334!2.72e-09!12;CL:0002620!5.61e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.57e-13;12!CL:0002541;9.23e-10;3!CL:0000134;1.41e-09;55!CL:0000723;2.24e-08;61!CL:0000135;2.61e-08;3!CL:0000388;2.61e-08;3!CL:0002580;4.22e-08;3!CL:0000349;4.64e-08;19!CL:0000048;9.09e-08;58!CL:0002620;2.41e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.59e-13,76;CL:0002334,8.84e-13,12;CL:0000048,5.86e-11,427;CL:0000723,1.36e-10,433;CL:0000034,4.02e-10,441;CL:0002541,1.01e-09,3;CL:0000134,3.95e-09,354;CL:0002320,1.06e-08,361;CL:0000135,1.79e-08,3;CL:0000388,1.79e-08,3;CL:0000219,2.59e-08,386;CL:0002580,3.56e-08,3;CL:0000349,5.65e-08,19;CL:0000136,2.06e-07,15;CL:0002620,2.54e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;7.93e-09;5!DOID:450;7.93e-09;5!DOID:66;7.93e-09;5!DOID:423;7.93e-09;5!DOID:0080000;7.93e-09;5!DOID:11722;7.93e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.24e-08,5;DOID:450,1.24e-08,5;DOID:66,1.24e-08,5;DOID:423,1.24e-08,5;DOID:0080000,1.24e-08,5;DOID:11722,1.24e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.67e-12!57;UBERON:0005631!6.75e-09!14;UBERON:0000158!6.75e-09!14;UBERON:0003102!2.77e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.99e-10;10!UBERON:0000158;7.99e-10;10!UBERON:0003124;9.23e-10;3!UBERON:0000920;9.23e-10;3!UBERON:0007846;2.61e-08;3!UBERON:0000043;2.61e-08;3!UBERON:0007845;2.61e-08;3!UBERON:0004457;3.93e-07;9!UBERON:0000042;3.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.06e-10,66;UBERON:0000920,1.01e-09,3;UBERON:0005631,6.17e-09,14;UBERON:0000158,6.17e-09,14;UBERON:0002384,9.59e-09,371;UBERON:0007846,1.79e-08,3;UBERON:0000043,1.79e-08,3;UBERON:0007845,1.79e-08,3;UBERON:0002199,9.90e-08,46;UBERON:0002416,9.90e-08,46;UBERON:0003124,7.24e-07,7;UBERON:0005406,9.05e-07,2 | |||
|phase1_expression=1.45342703416445,1.2846031433459,0.845726424575827,1.0007329835313,1.78784437770915,6.97870819280295,0,0,0.522371256399677,0,0,0.436882744260345,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0.361439152384566,0,1.15877215168659,0,1.45990461090791,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,1.77282716330412,0.794455084879313,2.0078563452417,0,0,0,0.49333509683432,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0.140450806702248,0.408308342509787,0.368502951935304,0,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0.226864366320042,2.15267562826634,1.06778694409284,2.11931901159562,6.60200411385685,0.206105058476878,1.8034837803194,0.37223371266318,2.19409231913646,0.779496041289589,1.26216887122057,0.552299391853796,1.2931684545505,1.77504796258307,0.604512589365842,0.67824236924195,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,3.12899064659632,1.92972281457866,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,1.3032332212413,0,0,0.231860809950154,0,0,0,0.761016608938393,0,0,0,0.468008530278475,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0.581267877027924,0,0,0.264145302039678,0,0,0,0.063497894292169,0,0,0,0.822619941626588,3.60411669412701,0,0.112131084345361,0,0.51336800074665,1.29271715757778,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.26161932027148,0,0.300946099727719,0,2.0694614258501,0,0,0.955719759148911,0.783204629850962,0.343143423810856,0,0,0,2.72814814301633,0,0.907170879989041,1.98486246255021,2.30192959932094,1.12264037773229,0.768834895534206,5.62877973973374,0.482561763430822,2.96836132889982,1.3878872442239,3.01854933032316,0.98552587216571,0,2.09178681227927,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,1.64007322849853,0.650756789328606,0,0,0,0,0.650060246036521,0,0.48335359146061,0.462145851343933,0.307007349452259,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0,0,1.39453664789186,2.20368642781448,0,0,0.532306030317022,0,0,0,1.48863347743867,0,0,1.27948895655667,2.56763392820352,0,0,0.359744915166629,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,2.43713489631284,3.16950440270266,0.136499911407986,0.282810863907425,2.26016233240486,0,0.66343897524122,0,0,1.9676842561399,0.202910376962704,0.30982349809975,0,0,1.27723753317057,0,0,3.79993743535795,2.96365403663912,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,6.20735660317994,0.890894042497916,4.91457123358771,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0.920418142519393,0,6.84287092855976,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,14.0360510282045,6.04544116452291,48.5061646176958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,1.59847687665704,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0.509991088181609,0,0,0,0,0,0,1.67569440763353,0.916641696046735,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.262272940674991,0,0,0,0,0,0,0,1.72844298240254,0,0,0.410462603746695,0,0.453248366080503,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0.303298235083296,0,7.76377205003967,0,0,0.597019211547496,0.467426619694449,1.66441758450784,0.378806010550178,1.76097531226803,0,1.14420034198462,0.151230923763239,0.621748802331122,0.295710299979268,0.318593534327405,0.449803112163605,0.621051827505038,3.31764966272684,6.11435943483388,1.5652351854352,0.150257608997218,6.85449381903832,4.47557806525128,0,0.214821114084977,0,3.18476710958893,0,3.09056134664514,2.02049693259551,0,0.192619830407303,0.643324774124777,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0.15726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| ||
|short_description=p3@CU676956 | |||
}} | }} |
Latest revision as of 20:29, 28 July 2015
Short description: | p3@CU676956 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU676956_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -429bp_to_CU676956_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.59e-13 | 76 |
preadipocyte | 8.84e-13 | 12 |
multi fate stem cell | 5.86e-11 | 427 |
somatic stem cell | 1.36e-10 | 433 |
stem cell | 4.02e-10 | 441 |
chorionic membrane mesenchymal stem cell | 1.01e-09 | 3 |
mesenchymal cell | 3.95e-09 | 354 |
connective tissue cell | 1.06e-08 | 361 |
fibrocyte | 1.79e-08 | 3 |
tendon cell | 1.79e-08 | 3 |
motile cell | 2.59e-08 | 386 |
preadipocyte of the breast | 3.56e-08 | 3 |
extraembryonic cell | 5.65e-08 | 19 |
fat cell | 2.06e-07 | 15 |
skin fibroblast | 2.54e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.06e-10 | 66 |
egg chorion | 1.01e-09 | 3 |
extraembryonic membrane | 6.17e-09 | 14 |
membranous layer | 6.17e-09 | 14 |
connective tissue | 9.59e-09 | 371 |
dense regular connective tissue | 1.79e-08 | 3 |
tendon | 1.79e-08 | 3 |
regular connective tissue | 1.79e-08 | 3 |
integument | 9.90e-08 | 46 |
integumental system | 9.90e-08 | 46 |
chorion | 7.24e-07 | 7 |
perirenal fat | 9.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.24e-08 | 5 |
myotonic disease | 1.24e-08 | 5 |
muscle tissue disease | 1.24e-08 | 5 |
myopathy | 1.24e-08 | 5 |
muscular disease | 1.24e-08 | 5 |
myotonic dystrophy | 1.24e-08 | 5 |