FFCP PHASE1:Hg19::chr2:121578016..121578033,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:121578016..121578033,+ | |||
|description=CAGE_peak_at_chr2:121578016..121578033,+ | |description=CAGE_peak_at_chr2:121578016..121578033,+ | ||
|id=chr2:121578016..121578033,+ | |id=chr2:121578016..121578033,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.41e-16!180;CL:0000057!4.23e-11!75;CL:0002620!1.18e-09!23 | |ontology_enrichment_celltype=CL:0000055!4.41e-16!180;CL:0000057!4.23e-11!75;CL:0002620!1.18e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.50e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.36e-09,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.95e-13;5!DOID:450;6.95e-13;5!DOID:66;6.95e-13;5!DOID:423;6.95e-13;5!DOID:0080000;6.95e-13;5!DOID:11722;6.95e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.52e-13,5;DOID:450,7.52e-13,5;DOID:66,7.52e-13,5;DOID:423,7.52e-13,5;DOID:0080000,7.52e-13,5;DOID:11722,7.52e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!3.41e-09!659;UBERON:0000475!4.48e-09!365;UBERON:0000481!1.91e-08!347;UBERON:0000914!1.92e-08!83;UBERON:0002329!1.92e-08!83;UBERON:0003077!1.92e-08!83;UBERON:0003059!1.92e-08!83;UBERON:0007282!1.92e-08!83;UBERON:0009618!1.92e-08!83;UBERON:0007285!1.92e-08!83;UBERON:0007023!1.54e-07!115;UBERON:0002385!1.70e-07!63;UBERON:0001015!1.70e-07!63;UBERON:0000383!1.70e-07!63;UBERON:0004290!7.75e-07!70 | |ontology_enrichment_uberon=UBERON:0000468!3.41e-09!659;UBERON:0000475!4.48e-09!365;UBERON:0000481!1.91e-08!347;UBERON:0000914!1.92e-08!83;UBERON:0002329!1.92e-08!83;UBERON:0003077!1.92e-08!83;UBERON:0003059!1.92e-08!83;UBERON:0007282!1.92e-08!83;UBERON:0009618!1.92e-08!83;UBERON:0007285!1.92e-08!83;UBERON:0007023!1.54e-07!115;UBERON:0002385!1.70e-07!63;UBERON:0001015!1.70e-07!63;UBERON:0000383!1.70e-07!63;UBERON:0004290!7.75e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.53e-07;2!UBERON:0003296;6.39e-07;4!UBERON:0010133;6.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.63e-07,2;UBERON:0003296,5.07e-07,4;UBERON:0010133,5.07e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.495065411840187,0.662794751455832,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,5.5670016293577,0.973269740605272,0.661743720148475,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,0.454072282934794,0,1.17160715916898,0.624320153660641,0,0.298897361103602,0,0.323745888736263,0,0.61246251376468,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,1.31693286264251,0.612975591598039,0,0,1.4351170855109,1.49490172172997,1.05965950579781,3.30100205692843,2.67936576019941,1.03056216018252,0.744467425326359,2.36286865137773,0.487185025805993,2.77677151668526,0.460249493211497,0.323292113637624,2.13005755509969,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0.207322110030741,0,0,0,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,1.86156681609409,0,0.257207374262142,0,0,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0,0.35142424497814,0.601892199455438,0,0,1.32845119707087,0.737476674166813,0.173767228936166,4.50342662164303,2.40200396667599,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0,0,0,0,0.308419387605311,0.355123450626254,0.98552587216571,1.55776328755086,0.232420756919918,0,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0,0.214840489736547,0.290033387828457,0.170453254832202,1.06838442776085,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.719489830333259,1.37268514868027,0.942499218765491,0,0,0.842516912477962,1.95053495635836,0,0,0.545999645631943,1.69686518344455,0,3.85955740482287,0,0,1.15755106853338,1.9676842561399,0,0.6196469961995,0.281695602532241,0.717056761020258,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,2.27683904259429,2.44954304171488,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0,0,2.56472854656027,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.552896299656123,0.591095237907095,0,0,0,2.46240827212151,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,2.4441205797345,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0,0,4.69596588426576,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.53746777989381,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.577000469484979,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,8.17862504570024,0,0,0,0.258565912723101,0,0,0,0.106787412567695,5.65935498358797,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.248385611765534,1.38348634936231,0,0,0,0,0.468334905806882,0,0.447764408660622,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.796483835818512,0.449803112163605,1.24210365501008,0.414706207840855,0,0,0.150257608997218,0,0.813741466409323,1.27294061441792,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.862598491173454,0.629063767423586,0.54604819096007,2.7157204792644,0.212574920101683,0.247871528518004,1.67593475391973,1.27201740261367,0,0,1.05802783107205,1.2249819094128,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0.762764190934334,0,1.19349733269765,1.27857558193737,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.60710550763486,0.336283722218824,8.49751845931284,7.05752793189023,0.266107110487916,0,0,0.0679697329768317,0.197318320688547,0,0,1.41287567130925,0.314231179832004,0,7.30526976407596,0,0,2.287249413653,0.94808167039636,0,3.82488199065675,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.410651227424988,3.4794432940146,1.94284397223656,0,0,0,0,0.439762066981716,0,0.694567422971502,1.96703604453562,0,3.18692818280077,0,0,0,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,2.92134555298607,0,0,0,0.0679914901909147,0,3.7031878836078,0.371995018166751,0,0,0.252332849670158,0,0,0,0,0,0,1.81868875723775,2.94760543171796,0,0,0.213233981900981,1.42838658878244,0.322944549180031,0.869046000142011,0,0.0636471582781649,0.404234377916439,0.217716747896961,0.684466602170562,0.134704106029175,0.286888821570705,2.99394320891412,0,0,7.7228912914776,0,4.69281884806909,2.68931177202306,2.44137706989443,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.495065411840187,0.662794751455832,1.34465029290355,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.940364164434263,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,5.5670016293577,0.973269740605272,0.661743720148475,0.221729397462564,0.263504357079378,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,0.454072282934794,0,1.17160715916898,0.624320153660641,0,0.298897361103602,0,0.323745888736263,0,0.61246251376468,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,1.31693286264251,0.612975591598039,0,0,1.4351170855109,1.49490172172997,1.05965950579781,3.30100205692843,2.67936576019941,1.03056216018252,0.744467425326359,2.36286865137773,0.487185025805993,2.77677151668526,0.460249493211497,0.323292113637624,2.13005755509969,0.302256294682921,1.01736355386293,0,0,0,0,0,0,0.207322110030741,0,0,0,0,2.76269842704961,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,1.86156681609409,0,0.257207374262142,0,0,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,1.77866236955724,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0,0.35142424497814,0.601892199455438,0,0,1.32845119707087,0.737476674166813,0.173767228936166,4.50342662164303,2.40200396667599,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0,0,0,0,0.308419387605311,0.355123450626254,0.98552587216571,1.55776328755086,0.232420756919918,0,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.614014698904518,0,0.214840489736547,0.290033387828457,0.170453254832202,1.06838442776085,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.719489830333259,1.37268514868027,0.942499218765491,0,0,0.842516912477962,1.95053495635836,0,0,0.545999645631943,1.69686518344455,0,3.85955740482287,0,0,1.15755106853338,1.9676842561399,0,0.6196469961995,0.281695602532241,0.717056761020258,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,2.27683904259429,2.44954304171488,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0,0,2.56472854656027,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.552896299656123,0.591095237907095,0,0,0,2.46240827212151,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,2.4441205797345,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0,0,4.69596588426576,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.53746777989381,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.577000469484979,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,8.17862504570024,0,0,0,0.258565912723101,0,0,0,0.106787412567695,5.65935498358797,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.248385611765534,1.38348634936231,0,0,0,0,0.468334905806882,0,0.447764408660622,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.796483835818512,0.449803112163605,1.24210365501008,0.414706207840855,0,0,0.150257608997218,0,0.813741466409323,1.27294061441792,0,1.39210127963548,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.862598491173454,0.629063767423586,0.54604819096007,2.7157204792644,0.212574920101683,0.247871528518004,1.67593475391973,1.27201740261367,0,0,1.05802783107205,1.2249819094128,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0.762764190934334,0,1.19349733269765,1.27857558193737,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.60710550763486,0.336283722218824,8.49751845931284,7.05752793189023,0.266107110487916,0,0,0.0679697329768317,0.197318320688547,0,0,1.41287567130925,0.314231179832004,0,7.30526976407596,0,0,2.287249413653,0.94808167039636,0,3.82488199065675,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.410651227424988,3.4794432940146,1.94284397223656,0,0,0,0,0.439762066981716,0,0.694567422971502,1.96703604453562,0,3.18692818280077,0,0,0,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,2.92134555298607,0,0,0,0.0679914901909147,0,3.7031878836078,0.371995018166751,0,0,0.252332849670158,0,0,0,0,0,0,1.81868875723775,2.94760543171796,0,0,0.213233981900981,1.42838658878244,0.322944549180031,0.869046000142011,0,0.0636471582781649,0.404234377916439,0.217716747896961,0.684466602170562,0.134704106029175,0.286888821570705,2.99394320891412,0,0,7.7228912914776,0,4.69281884806909,2.68931177202306,2.44137706989443,0,0.201273793591026,0 | ||
|short_description=p@chr2:121578016..121578033,+ | |short_description=p@chr2:121578016..121578033,+ | ||
}} | }} |
Latest revision as of 23:57, 28 July 2015
Short description: | p@chr2:121578016..121578033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:121578016..121578033, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.36e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.63e-07 | 2 |
gland of diencephalon | 5.07e-07 | 4 |
neuroendocrine gland | 5.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.52e-13 | 5 |
myotonic disease | 7.52e-13 | 5 |
muscle tissue disease | 7.52e-13 | 5 |
myopathy | 7.52e-13 | 5 |
muscular disease | 7.52e-13 | 5 |
myotonic dystrophy | 7.52e-13 | 5 |