FFCP PHASE1:Hg19::chr2:154449479..154449511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=289bp_to_ENST00000424322_5end | |association_with_transcript=289bp_to_ENST00000424322_5end | ||
|cluster_id=chr2:154449479..154449511,- | |||
|description=CAGE_peak_2_at_ENST00000424322_5end | |description=CAGE_peak_2_at_ENST00000424322_5end | ||
|id=chr2:154449479..154449511,- | |id=chr2:154449479..154449511,- | ||
|ontology_enrichment_celltype=CL:0000066!8.10e-12!254;CL:0002178!4.80e-11!3;CL:0000039!1.86e-07!7;CL:0000586!1.86e-07!7 | |ontology_enrichment_celltype=CL:0000066!8.10e-12!254;CL:0002178!4.80e-11!3;CL:0000039!1.86e-07!7;CL:0000586!1.86e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.97e-13;3!CL:0000167;3.61e-10;1!CL:0000164;3.61e-10;1!CL:0000502;3.61e-10;1!CL:0000172;3.61e-10;1!CL:1001319;3.61e-10;1!CL:1000600;3.61e-10;1!CL:0000319;3.61e-10;1!CL:0000173;3.61e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.81e-13,3;CL:0000319,3.29e-10,1;CL:1001319,3.61e-10,1;CL:1000600,3.61e-10,1;CL:0000167,3.96e-10,1;CL:0000164,3.96e-10,1;CL:0000502,3.96e-10,1;CL:0000172,3.96e-10,1;CL:0000173,3.96e-10,1;CL:0002351,3.96e-10,1;CL:0000066,1.01e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002351;3.61e-10;1 | |||
|ontology_enrichment_disease=DOID:305!1.21e-25!106;DOID:0050687!4.42e-24!143;DOID:162!7.39e-19!235;DOID:14566!3.09e-18!239;DOID:299!1.74e-11!25;DOID:0050615!3.62e-07!16;DOID:4929!6.00e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;1.20e-12;25!DOID:5662;7.40e-11;1!DOID:3111;2.08e-10;1!DOID:3603;2.08e-10;1!DOID:0050619;3.61e-10;1!DOID:3030;3.61e-10;1!DOID:1357;3.61e-10;1!DOID:4430;3.61e-10;1!DOID:0050615;1.94e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.86e-18,143;DOID:305,6.22e-17,106;DOID:162,5.96e-14,235;DOID:14566,1.35e-13,239;DOID:299,1.05e-12,25;DOID:5662,7.40e-11,1;DOID:3111,1.73e-10,1;DOID:3603,1.73e-10,1;DOID:0050619,3.01e-10,1;DOID:1357,3.01e-10,1;DOID:3030,3.29e-10,1;DOID:4430,3.96e-10,1;DOID:0050615,1.84e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0000466!7.23e-09!126;UBERON:0000077!1.97e-08!130;UBERON:0001041!2.40e-08!98;UBERON:0004921!2.40e-08!129;UBERON:0004185!2.40e-08!129;UBERON:0001007!1.24e-07!155;UBERON:0001555!1.24e-07!155;UBERON:0007026!1.24e-07!155;UBERON:0000464!9.31e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.61e-10;1!UBERON:0001764;3.61e-10;1!UBERON:0001825;3.61e-10;1!UBERON:0001256;3.61e-10;1!UBERON:0001259;3.61e-10;1!UBERON:0000945;4.37e-08;5!UBERON:0010039;4.37e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.01e-10,1;UBERON:0001825,3.01e-10,1;UBERON:0004645,3.61e-10,1;UBERON:0001256,3.61e-10,1;UBERON:0001259,3.61e-10,1 | |||
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| ||
|short_description=p2@ENST00000424322 | |short_description=p2@ENST00000424322 | ||
}} | }} |
Latest revision as of 01:31, 29 July 2015
Short description: | p2@ENST00000424322 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000424322_5end |
Coexpression cluster: | NA |
Association with transcript: | 289bp_to_ENST00000424322_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.81e-13 | 3 |
mucus secreting cell | 3.29e-10 | 1 |
bladder cell | 3.61e-10 | 1 |
lower urinary tract cell | 3.61e-10 | 1 |
peptide hormone secreting cell | 3.96e-10 | 1 |
enteroendocrine cell | 3.96e-10 | 1 |
type D enteroendocrine cell | 3.96e-10 | 1 |
somatostatin secreting cell | 3.96e-10 | 1 |
pancreatic D cell | 3.96e-10 | 1 |
progenitor cell of endocrine pancreas | 3.96e-10 | 1 |
epithelial cell | 1.01e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.01e-10 | 1 |
paranasal sinus | 3.01e-10 | 1 |
urinary bladder urothelium | 3.61e-10 | 1 |
wall of urinary bladder | 3.61e-10 | 1 |
mucosa of urinary bladder | 3.61e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.86e-18 | 143 |
carcinoma | 6.22e-17 | 106 |
cancer | 5.96e-14 | 235 |
disease of cellular proliferation | 1.35e-13 | 239 |
adenocarcinoma | 1.05e-12 | 25 |
pleomorphic carcinoma | 7.40e-11 | 1 |
cystadenocarcinoma | 1.73e-10 | 1 |
mucinous cystadenocarcinoma | 1.73e-10 | 1 |
paranasal sinus cancer | 3.01e-10 | 1 |
maxillary sinus cancer | 3.01e-10 | 1 |
mucinous adenocarcinoma | 3.29e-10 | 1 |
somatostatinoma | 3.96e-10 | 1 |
respiratory system cancer | 1.84e-09 | 16 |