FFCP PHASE1:Hg19::chr2:178179611..178179619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000443132_5end | |association_with_transcript=26bp_to_ENST00000443132_5end | ||
|cluster_id=chr2:178179611..178179619,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_4_at_ENST00000443132_5end | |description=CAGE_peak_4_at_ENST00000443132_5end | ||
|id=chr2:178179611..178179619,- | |id=chr2:178179611..178179619,- | ||
|ontology_enrichment_celltype=CL:0002623!2.83e-12!3;CL:0002251!4.80e-10!21;CL:0000622!1.02e-07!5 | |ontology_enrichment_celltype=CL:0002623!2.83e-12!3;CL:0002251!4.80e-10!21;CL:0000622!1.02e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.23e-66;1!UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2 | |||
|ontology_enrichment_disease=DOID:3151!1.98e-10!1;DOID:3149!1.98e-10!1 | |ontology_enrichment_disease=DOID:3151!1.98e-10!1;DOID:3149!1.98e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.34e-66;1!DOID:3149;3.34e-66;1!DOID:3451;5.96e-34;2!DOID:4159;5.96e-34;2!DOID:0060122;5.96e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.66e-66,1;DOID:3149,4.66e-66,1;DOID:3451,7.05e-34,2;DOID:4159,7.05e-34,2;DOID:0060122,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0006562!9.35e-20!11;UBERON:0000166!1.69e-19!21;UBERON:0000161!9.19e-15!35;UBERON:0000165!1.89e-14!28;UBERON:0000930!1.89e-14!28;UBERON:0001042!2.86e-14!10;UBERON:0009145!2.86e-14!10;UBERON:0000974!6.07e-14!10;UBERON:0001723!6.98e-13!3;UBERON:0001033!6.98e-13!3;UBERON:0010056!6.98e-13!3;UBERON:0000078!4.93e-12!18;UBERON:0001444!1.45e-10!48;UBERON:0002372!2.59e-10!1;UBERON:0001961!2.59e-10!1;UBERON:0001744!2.59e-10!1;UBERON:0001735!2.59e-10!1;UBERON:0007029!3.10e-10!1;UBERON:0000997!3.40e-10!1;UBERON:0005056!3.40e-10!1;UBERON:0000014!6.34e-10!4;UBERON:0003343!1.73e-09!4;UBERON:0004785!1.73e-09!4;UBERON:0003102!2.69e-09!95;UBERON:0001004!2.00e-08!72;UBERON:0003408!3.78e-08!10;UBERON:0003729!9.23e-08!5;UBERON:0001557!1.38e-07!19;UBERON:0000344!4.74e-07!12;UBERON:0000002!9.15e-07!6;UBERON:0001560!9.15e-07!6 | |ontology_enrichment_uberon=UBERON:0006562!9.35e-20!11;UBERON:0000166!1.69e-19!21;UBERON:0000161!9.19e-15!35;UBERON:0000165!1.89e-14!28;UBERON:0000930!1.89e-14!28;UBERON:0001042!2.86e-14!10;UBERON:0009145!2.86e-14!10;UBERON:0000974!6.07e-14!10;UBERON:0001723!6.98e-13!3;UBERON:0001033!6.98e-13!3;UBERON:0010056!6.98e-13!3;UBERON:0000078!4.93e-12!18;UBERON:0001444!1.45e-10!48;UBERON:0002372!2.59e-10!1;UBERON:0001961!2.59e-10!1;UBERON:0001744!2.59e-10!1;UBERON:0001735!2.59e-10!1;UBERON:0007029!3.10e-10!1;UBERON:0000997!3.40e-10!1;UBERON:0005056!3.40e-10!1;UBERON:0000014!6.34e-10!4;UBERON:0003343!1.73e-09!4;UBERON:0004785!1.73e-09!4;UBERON:0003102!2.69e-09!95;UBERON:0001004!2.00e-08!72;UBERON:0003408!3.78e-08!10;UBERON:0003729!9.23e-08!5;UBERON:0001557!1.38e-07!19;UBERON:0000344!4.74e-07!12;UBERON:0000002!9.15e-07!6;UBERON:0001560!9.15e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;2.62e-23;3!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0000014;9.45e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,2.62e-23,3;UBERON:0009143,2.62e-23,3;UBERON:0001723,3.27e-23,3;UBERON:0001033,3.27e-23,3;UBERON:0010056,3.27e-23,3;UBERON:0000014,1.03e-17,4;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11 | |||
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|short_description=p4@ENST00000443132 | |short_description=p4@ENST00000443132 | ||
}} | }} | ||
Latest revision as of 02:54, 29 July 2015
| Short description: | p4@ENST00000443132 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_ENST00000443132_5end |
| Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
| Association with transcript: | 26bp_to_ENST00000443132_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| esophagus | 2.62e-23 | 3 |
| esophageal region | 2.62e-23 | 3 |
| tongue | 3.27e-23 | 3 |
| gustatory system | 3.27e-23 | 3 |
| future tongue | 3.27e-23 | 3 |
| zone of skin | 1.03e-17 | 4 |
| chordate pharynx | 6.13e-08 | 10 |
| pharyngeal region of foregut | 6.13e-08 | 10 |
| pharynx | 2.47e-07 | 11 |
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 4.66e-66 | 1 |
| keratoacanthoma | 4.66e-66 | 1 |
| skin carcinoma | 7.05e-34 | 2 |
| skin cancer | 7.05e-34 | 2 |
| integumentary system cancer | 7.05e-34 | 2 |