FFCP PHASE1:Hg19::chr2:238267705..238267736,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:238267705..238267736,-
|short_description=p@chr2:238267705..238267736,-
|description=CAGE_peak_at_chr2:238267705..238267736,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238267705..238267736,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238267705..238267736,- | |||
|id=chr2:238267705..238267736,- | |||
|ontology_enrichment_celltype=CL:0000057!1.07e-20!75;CL:0000055!1.44e-18!180;CL:0002620!1.68e-11!23;CL:0000048!2.83e-08!430;CL:0000723!1.06e-07!436;CL:0002540!1.77e-07!6;CL:0000034!5.63e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002540;1.66e-15;6!CL:0000134;4.94e-10;55!CL:0000723;6.31e-10;61!CL:0000048;8.55e-10;58!CL:0002092;5.59e-09;10!CL:0002570;2.41e-08;8!CL:0000034;1.69e-07;69!CL:0002620;2.86e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.34e-15,6;CL:0002092,4.94e-09,10;CL:0000057,8.69e-09,76;CL:0002320,2.44e-08,361;CL:0000048,2.87e-08,427;CL:0002570,4.41e-08,8;CL:0000723,5.91e-08,433;CL:0000134,1.18e-07,354;CL:0000034,1.49e-07,441;CL:0002620,4.67e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;8.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.26e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.07e-10!45;UBERON:0002416!4.07e-10!45;UBERON:0003102!2.66e-08!95;UBERON:0002097!3.20e-08!40;UBERON:0000914!2.23e-07!83;UBERON:0002329!2.23e-07!83;UBERON:0003077!2.23e-07!83;UBERON:0003059!2.23e-07!83;UBERON:0007282!2.23e-07!83;UBERON:0009618!2.23e-07!83;UBERON:0007285!2.23e-07!83;UBERON:0002384!8.37e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;2.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.52e-08,371;UBERON:0002199,1.94e-07,46;UBERON:0002416,1.94e-07,46 | |||
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| ||
|short_description=p@chr2:238267705..238267736,- | |||
}} | }} |
Latest revision as of 08:10, 29 July 2015
Short description: | p@chr2:238267705..238267736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238267705..238267736, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.34e-15 | 6 |
bone marrow cell | 4.94e-09 | 10 |
fibroblast | 8.69e-09 | 76 |
connective tissue cell | 2.44e-08 | 361 |
multi fate stem cell | 2.87e-08 | 427 |
mesenchymal stem cell of adipose | 4.41e-08 | 8 |
somatic stem cell | 5.91e-08 | 433 |
mesenchymal cell | 1.18e-07 | 354 |
stem cell | 1.49e-07 | 441 |
skin fibroblast | 4.67e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.52e-08 | 371 |
integument | 1.94e-07 | 46 |
integumental system | 1.94e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.26e-07 | 2 |