FFCP PHASE1:Hg19::chr3:112324210..112324254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112324210..112324254,- | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_at_chr3:112324210..112324254,- | |description=CAGE_peak_at_chr3:112324210..112324254,- | ||
|id=chr3:112324210..112324254,- | |id=chr3:112324210..112324254,- | ||
|ontology_enrichment_celltype=CL:0000055!2.53e-17!180;CL:0000057!2.06e-11!75;CL:0000680!1.06e-09!57;CL:0000056!1.06e-09!57;CL:0000355!1.06e-09!57;CL:0002334!7.10e-09!12;CL:0000136!1.54e-08!15;CL:0000187!2.48e-08!54;CL:0002620!4.63e-08!23;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60;CL:0000183!9.51e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.53e-17!180;CL:0000057!2.06e-11!75;CL:0000680!1.06e-09!57;CL:0000056!1.06e-09!57;CL:0000355!1.06e-09!57;CL:0002334!7.10e-09!12;CL:0000136!1.54e-08!15;CL:0000187!2.48e-08!54;CL:0002620!4.63e-08!23;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60;CL:0000183!9.51e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.35e-11;12!CL:0000136;2.02e-09;13!CL:1000306;8.31e-09;4!CL:0002547;8.31e-09;4!CL:0002620;2.87e-08;23!CL:0002615;1.50e-07;3!CL:0000135;3.36e-07;3!CL:0000388;3.36e-07;3!CL:0002579;4.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.23e-15,76;CL:0000136,6.78e-12,15;CL:0002334,2.17e-11,12;CL:1000306,5.81e-09,4;CL:0002547,5.81e-09,4;CL:0002320,1.16e-08,361;CL:0002620,2.48e-08,23;CL:0000134,3.58e-08,354;CL:0000048,5.12e-08,427;CL:0000723,1.17e-07,433;CL:0002615,1.68e-07,3;CL:0000034,3.37e-07,441;CL:0000135,3.46e-07,3;CL:0000388,3.46e-07,3;CL:0002579,6.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.78e-07;5!DOID:450;4.78e-07;5!DOID:66;4.78e-07;5!DOID:423;4.78e-07;5!DOID:0080000;4.78e-07;5!DOID:11722;4.78e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.36e-07,5;DOID:450,3.36e-07,5;DOID:66,3.36e-07,5;DOID:423,3.36e-07,5;DOID:0080000,3.36e-07,5;DOID:11722,3.36e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.22e-10!63;UBERON:0001015!2.22e-10!63;UBERON:0000383!2.22e-10!63;UBERON:0001134!8.55e-10!61;UBERON:0002036!8.55e-10!61;UBERON:0003082!8.55e-10!61;UBERON:0004290!3.14e-09!70;UBERON:0000948!2.66e-08!24;UBERON:0005498!2.66e-08!24;UBERON:0004140!2.66e-08!24;UBERON:0009881!2.66e-08!24;UBERON:0004141!2.66e-08!24;UBERON:0003084!2.66e-08!24;UBERON:0007005!2.66e-08!24;UBERON:0004139!2.66e-08!24;UBERON:0004291!2.66e-08!24;UBERON:0000914!3.58e-08!83;UBERON:0002329!3.58e-08!83;UBERON:0003077!3.58e-08!83;UBERON:0003059!3.58e-08!83;UBERON:0007282!3.58e-08!83;UBERON:0009618!3.58e-08!83;UBERON:0007285!3.58e-08!83;UBERON:0000486!7.10e-08!82;UBERON:0007100!2.19e-07!27;UBERON:0004872!4.60e-07!84;UBERON:0001013!5.89e-07!14;UBERON:0003688!9.76e-07!6;UBERON:0002358!9.76e-07!6;UBERON:0003684!9.76e-07!6;UBERON:0001178!9.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.69e-14;9!UBERON:0000042;1.69e-14;9!UBERON:0003688;5.84e-13;6!UBERON:0002358;5.84e-13;6!UBERON:0003684;5.84e-13;6!UBERON:0001178;5.84e-13;6!UBERON:0001013;2.56e-09;14!UBERON:0004797;8.31e-09;4!UBERON:0000415;8.31e-09;4!UBERON:0007240;8.31e-09;4!UBERON:0005742;8.31e-09;4!UBERON:0005734;8.31e-09;4!UBERON:0004664;8.31e-09;4!UBERON:0004663;8.31e-09;4!UBERON:0002199;1.41e-07;46!UBERON:0002416;1.41e-07;46!UBERON:0007846;3.36e-07;3!UBERON:0000043;3.36e-07;3!UBERON:0007845;3.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.54e-13,6;UBERON:0002358,9.54e-13,6;UBERON:0003684,9.54e-13,6;UBERON:0001178,9.54e-13,6;UBERON:0004797,1.23e-10,7;UBERON:0004457,2.65e-10,12;UBERON:0000042,2.65e-10,12;UBERON:0002199,2.77e-10,46;UBERON:0002416,2.77e-10,46;UBERON:0002384,1.80e-09,371;UBERON:0001013,2.17e-09,14;UBERON:0000415,5.81e-09,4;UBERON:0007240,5.81e-09,4;UBERON:0005742,5.81e-09,4;UBERON:0005734,5.81e-09,4;UBERON:0004664,5.81e-09,4;UBERON:0004663,5.81e-09,4;UBERON:0002097,2.34e-08,41;UBERON:0007846,3.46e-07,3;UBERON:0000043,3.46e-07,3;UBERON:0007845,3.46e-07,3 | |||
|phase1_expression=3.08853244759946,6.20891519283851,6.48390258841467,6.00439790118782,4.02264984984559,10.4680622892044,2.53299878168311,0.631719873426831,1.04474251279935,0,0,1.52908960491121,0.527533956456907,1.36142988256051,1.65698687863958,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3233045996527,0.670700859703636,0.895037932904712,1.44575660953827,1.00267582127178,4.49024208778554,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,4.05217637326655,1.85372853138506,11.7603014507014,3.54668382198357,2.24271040056923,0,0.98667019366864,0.311211035399766,0,0,0,1.15235184896,0,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.567160915800105,4.48474089222155,2.98980344345994,4.23863802319124,2.70081986475962,0.309157587715317,2.31876486041066,1.30281799432113,2.86919764810153,0.68205903612839,2.01947019395292,2.57739716198438,0.969876340912871,6.74518225781567,1.20902517873168,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,6.62951785718023,1.8936365013957,0,0,0,0,0,0,0,0,0,0.36669142910475,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0,0,0.325736184293735,0.710783897485092,0,0,0,0.399891964728228,0,0,0,0.958499421966331,1.14861935834114,0,3.61953266668948,0.61642896765115,1.25342674267927,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,2.07970861530807,0.713715955188647,0.788512075169673,2.22568688486155,1.20378439891088,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,8.32177197552485,0.604780586659361,5.45837177201309,1.2276957863045,1.40330047216537,8.84160129864337,1.02341449813341,12.707459770345,2.96836132889982,0.308419387605311,1.24293207719189,0.328508624055237,1.03850885836724,0.581051892299796,0,0,0.184161977871793,0.574072240823034,0.910455840033585,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.413509717453592,0.537101224341368,0.435050081742686,0.0852266274161009,0.623224249527161,0,0.192190067365106,0,0,1.85938219718914,8.81474571125792,0,0.616067160352178,1.59691809095107,0.869932992075073,0.9266210955196,0,0.372158369359667,0,0.762520775695299,0.255897791311334,4.2793898803392,0,0,0.359744915166629,0.54907405947211,0,0.202182481573316,0,0.842516912477962,0.48763373908959,0.487426979262569,1.05650146756755,0.136499911407986,0.707027159768564,2.26016233240486,0,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0.430234056612155,0.785992328104969,0,0,4.85547561184627,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.890894042497916,2.15012491469462,0,0,0.222617410045812,0,0,0.796991953004279,0.276283915531148,0,0,0,2.79935628895627,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.39781334593624,0.343972064943233,0,0,0,0.290967049465258,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0,0.240476460754601,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,5.30636562417283,2.29160424011684,0.717873024576814,0,0,0.223171457441873,0,2.16179930125442,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,2.1440859791201,0.662091970365432,0,2.17199840701485,0,1.63293680054705,0,0,1.02232813071253,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,1.49254802886874,1.63599316893057,1.66441758450784,0.947015026375446,2.0125432140206,2.66943366478961,1.83072054717539,2.26846385644859,0.466311601748341,1.77426179987561,0.318593534327405,0.449803112163605,0.931577741257556,0.829412415681711,2.12673371646396,1.04349012362347,0.75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| ||
|short_description=p@chr3:112324210..112324254,- | |short_description=p@chr3:112324210..112324254,- | ||
}} | }} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112324210..112324254, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112324210..112324254, - |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.23e-15 | 76 |
fat cell | 6.78e-12 | 15 |
preadipocyte | 2.17e-11 | 12 |
fibroblast of tunica adventitia of artery | 5.81e-09 | 4 |
fibroblast of the aortic adventitia | 5.81e-09 | 4 |
connective tissue cell | 1.16e-08 | 361 |
skin fibroblast | 2.48e-08 | 23 |
mesenchymal cell | 3.58e-08 | 354 |
multi fate stem cell | 5.12e-08 | 427 |
somatic stem cell | 1.17e-07 | 433 |
adipocyte of omentum tissue | 1.68e-07 | 3 |
stem cell | 3.37e-07 | 441 |
fibrocyte | 3.46e-07 | 3 |
tendon cell | 3.46e-07 | 3 |
omentum preadipocyte | 6.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.54e-13 | 6 |
peritoneum | 9.54e-13 | 6 |
abdominal cavity | 9.54e-13 | 6 |
visceral peritoneum | 9.54e-13 | 6 |
blood vessel layer | 1.23e-10 | 7 |
cavity lining | 2.65e-10 | 12 |
serous membrane | 2.65e-10 | 12 |
integument | 2.77e-10 | 46 |
integumental system | 2.77e-10 | 46 |
connective tissue | 1.80e-09 | 371 |
adipose tissue | 2.17e-09 | 14 |
artery wall | 5.81e-09 | 4 |
tunica adventitia of artery | 5.81e-09 | 4 |
adventitia | 5.81e-09 | 4 |
tunica adventitia of blood vessel | 5.81e-09 | 4 |
aorta tunica adventitia | 5.81e-09 | 4 |
aorta wall | 5.81e-09 | 4 |
skin of body | 2.34e-08 | 41 |
dense regular connective tissue | 3.46e-07 | 3 |
tendon | 3.46e-07 | 3 |
regular connective tissue | 3.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.36e-07 | 5 |
myotonic disease | 3.36e-07 | 5 |
muscle tissue disease | 3.36e-07 | 5 |
myopathy | 3.36e-07 | 5 |
muscular disease | 3.36e-07 | 5 |
myotonic dystrophy | 3.36e-07 | 5 |