FFCP PHASE1:Hg19::chr3:112324351..112324362,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112324351..112324362,- | |||
|description=CAGE_peak_at_chr3:112324351..112324362,- | |description=CAGE_peak_at_chr3:112324351..112324362,- | ||
|id=chr3:112324351..112324362,- | |id=chr3:112324351..112324362,- | ||
|ontology_enrichment_celltype=CL:0000055!6.27e-15!180;CL:0002620!2.07e-10!23;CL:0000057!3.80e-10!75;CL:0000680!2.02e-08!57;CL:0000056!2.02e-08!57;CL:0000355!2.02e-08!57;CL:0000187!9.00e-07!54 | |ontology_enrichment_celltype=CL:0000055!6.27e-15!180;CL:0002620!2.07e-10!23;CL:0000057!3.80e-10!75;CL:0000680!2.02e-08!57;CL:0000056!2.02e-08!57;CL:0000355!2.02e-08!57;CL:0000187!9.00e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002579;1.60e-13;3!CL:0002616;2.65e-11;1!CL:0002591;3.75e-11;1!CL:0000222;9.04e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.02e-13,3;CL:0002616,2.79e-11,1;CL:0002591,3.76e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.33e-08!5;DOID:450!2.33e-08!5;DOID:66!2.33e-08!5;DOID:423!2.33e-08!5;DOID:0080000!2.33e-08!5;DOID:11722!2.33e-08!5 | |ontology_enrichment_disease=DOID:17!2.33e-08!5;DOID:450!2.33e-08!5;DOID:66!2.33e-08!5;DOID:423!2.33e-08!5;DOID:0080000!2.33e-08!5;DOID:11722!2.33e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.79e-08;5!DOID:450;1.79e-08;5!DOID:66;1.79e-08;5!DOID:423;1.79e-08;5!DOID:0080000;1.79e-08;5!DOID:11722;1.79e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.60e-08,5;DOID:450,1.60e-08,5;DOID:66,1.60e-08,5;DOID:423,1.60e-08,5;DOID:0080000,1.60e-08,5;DOID:11722,1.60e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.65e-08!40;UBERON:0002385!8.09e-08!63;UBERON:0001015!8.09e-08!63;UBERON:0000383!8.09e-08!63;UBERON:0002199!9.15e-08!45;UBERON:0002416!9.15e-08!45;UBERON:0004290!1.14e-07!70;UBERON:0001134!1.92e-07!61;UBERON:0002036!1.92e-07!61;UBERON:0003082!1.92e-07!61;UBERON:0003102!3.28e-07!95;UBERON:0000914!3.98e-07!83;UBERON:0002329!3.98e-07!83;UBERON:0003077!3.98e-07!83;UBERON:0003059!3.98e-07!83;UBERON:0007282!3.98e-07!83;UBERON:0009618!3.98e-07!83;UBERON:0007285!3.98e-07!83;UBERON:0004923!7.61e-07!57;UBERON:0000486!7.80e-07!82;UBERON:0004457!9.85e-07!12;UBERON:0000042!9.85e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.71e-15;6!UBERON:0002358;6.71e-15;6!UBERON:0003684;6.71e-15;6!UBERON:0001178;6.71e-15;6!UBERON:0007029;9.04e-11;1!UBERON:0002135;9.04e-11;1!UBERON:0007195;9.04e-11;1!UBERON:0004457;4.05e-10;9!UBERON:0000042;4.05e-10;9!UBERON:0000948;3.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.06e-15,6;UBERON:0002358,5.06e-15,6;UBERON:0003684,5.06e-15,6;UBERON:0001178,5.06e-15,6;UBERON:0007029,7.46e-11,1;UBERON:0002135,9.97e-11,1;UBERON:0007195,1.46e-10,1;UBERON:0000948,6.33e-10,24;UBERON:0005498,6.33e-10,24;UBERON:0004140,6.33e-10,24;UBERON:0009881,6.33e-10,24;UBERON:0004141,6.33e-10,24;UBERON:0003084,6.33e-10,24;UBERON:0007005,6.33e-10,24;UBERON:0004139,6.33e-10,24;UBERON:0004291,6.33e-10,24;UBERON:0007100,8.34e-09,27;UBERON:0004457,8.99e-08,12;UBERON:0000042,8.99e-08,12 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,2.00146596706261,0.893922188854576,5.23403114460221,0,0,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,1.00267582127178,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.132409180813219,5.73673241497627,0.354668382198357,3.36406560085384,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,1.4351170855109,0.85422955527427,0.635795703478686,1.50045548042201,0.515262646192195,0.515281080091258,0.744467425326359,0.168776332241266,0,0.252433774244115,0.552299391853796,0,1.77504796258307,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0.992431231275107,0.61384789315225,0.841980283299221,1.79394808957981,0,1.44768529029247,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.356128142586949,0,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0.38126038784765,0,1.28381696410176,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,2.26016233240486,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.568209015825267,0.754703705257725,0,0.686520205190771,1.36107831386915,0,0,0,0,0,0.414706207840855,0.53168342911599,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,2.00146596706261,0.893922188854576,5.23403114460221,0,0,0.522371256399677,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,1.00267582127178,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.132409180813219,5.73673241497627,0.354668382198357,3.36406560085384,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,1.4351170855109,0.85422955527427,0.635795703478686,1.50045548042201,0.515262646192195,0.515281080091258,0.744467425326359,0.168776332241266,0,0.252433774244115,0.552299391853796,0,1.77504796258307,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.35142424497814,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0.992431231275107,0.61384789315225,0.841980283299221,1.79394808957981,0,1.44768529029247,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.356128142586949,0,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0.38126038784765,0,1.28381696410176,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,2.26016233240486,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.568209015825267,0.754703705257725,0,0.686520205190771,1.36107831386915,0,0,0,0,0,0.414706207840855,0.53168342911599,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:112324351..112324362,- | |short_description=p@chr3:112324351..112324362,- | ||
}} | }} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112324351..112324362, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112324351..112324362, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.02e-13 | 3 |
perirenal adipocyte cell | 2.79e-11 | 1 |
smooth muscle cell of the pulmonary artery | 3.76e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.06e-15 | 6 |
peritoneum | 5.06e-15 | 6 |
abdominal cavity | 5.06e-15 | 6 |
visceral peritoneum | 5.06e-15 | 6 |
surface | 7.46e-11 | 1 |
mitral valve | 9.97e-11 | 1 |
stroma of bone marrow | 1.46e-10 | 1 |
heart | 6.33e-10 | 24 |
primitive heart tube | 6.33e-10 | 24 |
primary heart field | 6.33e-10 | 24 |
anterior lateral plate mesoderm | 6.33e-10 | 24 |
heart tube | 6.33e-10 | 24 |
heart primordium | 6.33e-10 | 24 |
cardiac mesoderm | 6.33e-10 | 24 |
cardiogenic plate | 6.33e-10 | 24 |
heart rudiment | 6.33e-10 | 24 |
primary circulatory organ | 8.34e-09 | 27 |
cavity lining | 8.99e-08 | 12 |
serous membrane | 8.99e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.60e-08 | 5 |
myotonic disease | 1.60e-08 | 5 |
muscle tissue disease | 1.60e-08 | 5 |
myopathy | 1.60e-08 | 5 |
muscular disease | 1.60e-08 | 5 |
myotonic dystrophy | 1.60e-08 | 5 |