FFCP PHASE1:Hg19::chr3:112359556..112359568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112359556..112359568,+ | |||
|description=CAGE_peak_at_chr3:112359556..112359568,+ | |description=CAGE_peak_at_chr3:112359556..112359568,+ | ||
|id=chr3:112359556..112359568,+ | |id=chr3:112359556..112359568,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.16e-16!23;CL:0000057!1.41e-12!75;CL:1000306!5.94e-09!4;CL:0002547!5.94e-09!4;CL:0000055!1.48e-07!180 | |ontology_enrichment_celltype=CL:0002620!1.16e-16!23;CL:0000057!1.41e-12!75;CL:1000306!5.94e-09!4;CL:0002547!5.94e-09!4;CL:0000055!1.48e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.67e-18;23!CL:0002616;4.44e-18;1!CL:0002615;9.64e-07;3!CL:0000346;9.64e-07;3!CL:1000428;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.55e-18,23;CL:0002616,4.44e-18,1;CL:0000057,2.48e-10,76;CL:0000346,9.12e-07,3;CL:1000428,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.95e-12!5;DOID:450!8.95e-12!5;DOID:66!8.95e-12!5;DOID:423!8.95e-12!5;DOID:0080000!8.95e-12!5;DOID:11722!8.95e-12!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.85e-14;5!DOID:450;2.85e-14;5!DOID:66;2.85e-14;5!DOID:423;2.85e-14;5!DOID:0080000;2.85e-14;5!DOID:11722;2.85e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.76e-14,5;DOID:450,2.76e-14,5;DOID:66,2.76e-14,5;DOID:423,2.76e-14,5;DOID:0080000,2.76e-14,5;DOID:11722,2.76e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.16e-10!40;UBERON:0000415!5.94e-09!4;UBERON:0007240!5.94e-09!4;UBERON:0005742!5.94e-09!4;UBERON:0005734!5.94e-09!4;UBERON:0004664!5.94e-09!4;UBERON:0004663!5.94e-09!4;UBERON:0002199!5.97e-09!45;UBERON:0002416!5.97e-09!45;UBERON:0004457!4.96e-07!12;UBERON:0000042!4.96e-07!12 | |ontology_enrichment_uberon=UBERON:0002097!2.16e-10!40;UBERON:0000415!5.94e-09!4;UBERON:0007240!5.94e-09!4;UBERON:0005742!5.94e-09!4;UBERON:0005734!5.94e-09!4;UBERON:0004664!5.94e-09!4;UBERON:0004663!5.94e-09!4;UBERON:0002199!5.97e-09!45;UBERON:0002416!5.97e-09!45;UBERON:0004457!4.96e-07!12;UBERON:0000042!4.96e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.01e-12;41!UBERON:0005406;1.03e-09;2!UBERON:0002199;1.54e-08;46!UBERON:0002416;1.54e-08;46!UBERON:0003102;6.91e-08;50!UBERON:0000412;9.64e-07;3!UBERON:0001992;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.01e-14,41;UBERON:0002199,7.75e-13,46;UBERON:0002416,7.75e-13,46;UBERON:0005406,1.03e-09,2;UBERON:0000412,9.12e-07,3;UBERON:0001992,9.12e-07,3 | |||
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|phase1_expression=0,0,0,1.0007329835313,0,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,2.29469296599051,0.709336764396714,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,6.45802688479903,0,0.211931901159562,1.20036438433761,0.103052529238439,2.83404594050192,0,0.168776332241266,0,6.05841058185875,0,0.161646056818812,2.84007674013291,0.201504196455281,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0,0,0,0,0,0,0,0,5.66662224295152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0.601030435988874,0,0,0,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr3:112359556..112359568,+ | |short_description=p@chr3:112359556..112359568,+ | ||
}} | }} |
Latest revision as of 14:20, 29 July 2015
Short description: | p@chr3:112359556..112359568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112359556..112359568, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.55e-18 | 23 |
perirenal adipocyte cell | 4.44e-18 | 1 |
fibroblast | 2.48e-10 | 76 |
hair follicle dermal papilla cell | 9.12e-07 | 3 |
stem cell of epidermis | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.01e-14 | 41 |
integument | 7.75e-13 | 46 |
integumental system | 7.75e-13 | 46 |
perirenal fat | 1.03e-09 | 2 |
dermal papilla | 9.12e-07 | 3 |
papillary layer of dermis | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.76e-14 | 5 |
myotonic disease | 2.76e-14 | 5 |
muscle tissue disease | 2.76e-14 | 5 |
myopathy | 2.76e-14 | 5 |
muscular disease | 2.76e-14 | 5 |
myotonic dystrophy | 2.76e-14 | 5 |