FFCP PHASE1:Hg19::chr3:120115609..120115624,-: Difference between revisions
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|id=chr3:120115609..120115624,-
|short_description=p@chr3:120115609..120115624,-
|description=CAGE_peak_at_chr3:120115609..120115624,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:120115609..120115624,- | |||
|coexpression_cluster_id=C605 | |||
|description=CAGE_peak_at_chr3:120115609..120115624,- | |||
|id=chr3:120115609..120115624,- | |||
|ontology_enrichment_celltype=CL:0000055!5.13e-25!180;CL:0000057!1.91e-16!75;CL:0002334!4.32e-09!12;CL:0000499!1.01e-08!27;CL:0000680!1.03e-08!57;CL:0000056!1.03e-08!57;CL:0000355!1.03e-08!57;CL:0000222!1.92e-08!119;CL:0000187!1.73e-07!54;CL:0000393!2.81e-07!60;CL:0000211!2.81e-07!60;CL:0002620!3.88e-07!23;CL:0000192!3.94e-07!42;CL:0000514!3.94e-07!42;CL:0000359!7.45e-07!32;CL:0000183!7.71e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.12e-11;12!CL:0002620;7.30e-11;23!CL:0000499;4.14e-09;28!CL:0000153;4.14e-08;9!CL:0000447;4.14e-08;9!CL:0002615;2.33e-07;3!CL:0000135;2.45e-07;3!CL:0000388;2.45e-07;3!CL:0002570;3.05e-07;8!CL:0002579;3.78e-07;3!CL:0000136;4.19e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.02e-16,76;CL:0002334,1.27e-11,12;CL:0002620,1.04e-10,23;CL:0000136,1.23e-09,15;CL:0002320,1.45e-09,361;CL:0000499,2.57e-09,28;CL:0000048,8.58e-09,427;CL:0000134,1.65e-08,354;CL:0000723,2.09e-08,433;CL:0000153,4.34e-08,9;CL:0000447,4.34e-08,9;CL:0000034,6.54e-08,441;CL:0002615,2.17e-07,3;CL:0000135,2.21e-07,3;CL:0000388,2.21e-07,3;CL:0002570,2.65e-07,8;CL:0002579,3.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.12e-07;5!DOID:450;9.12e-07;5!DOID:66;9.12e-07;5!DOID:423;9.12e-07;5!DOID:0080000;9.12e-07;5!DOID:11722;9.12e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.19e-07,5;DOID:450,7.19e-07,5;DOID:66,7.19e-07,5;DOID:423,7.19e-07,5;DOID:0080000,7.19e-07,5;DOID:11722,7.19e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.68e-09!83;UBERON:0002329!3.68e-09!83;UBERON:0003077!3.68e-09!83;UBERON:0003059!3.68e-09!83;UBERON:0007282!3.68e-09!83;UBERON:0009618!3.68e-09!83;UBERON:0007285!3.68e-09!83;UBERON:0002385!6.48e-09!63;UBERON:0001015!6.48e-09!63;UBERON:0000383!6.48e-09!63;UBERON:0001134!7.38e-09!61;UBERON:0002036!7.38e-09!61;UBERON:0003082!7.38e-09!61;UBERON:0004290!2.80e-08!70;UBERON:0005256!5.41e-08!143;UBERON:0000486!1.43e-07!82;UBERON:0002100!4.23e-07!216;UBERON:0004457!9.36e-07!12;UBERON:0000042!9.36e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.20e-14;9!UBERON:0000042;1.20e-14;9!UBERON:0003688;7.49e-13;6!UBERON:0002358;7.49e-13;6!UBERON:0003684;7.49e-13;6!UBERON:0001178;7.49e-13;6!UBERON:0001013;1.01e-08;14!UBERON:0007846;2.45e-07;3!UBERON:0000043;2.45e-07;3!UBERON:0007845;2.45e-07;3!UBERON:0002199;5.98e-07;46!UBERON:0002416;5.98e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.77e-13,6;UBERON:0002358,5.77e-13,6;UBERON:0003684,5.77e-13,6;UBERON:0001178,5.77e-13,6;UBERON:0004457,1.41e-10,12;UBERON:0000042,1.41e-10,12;UBERON:0002199,1.17e-09,46;UBERON:0002416,1.17e-09,46;UBERON:0002384,2.11e-09,371;UBERON:0002097,6.48e-09,41;UBERON:0001013,7.42e-09,14;UBERON:0007846,2.21e-07,3;UBERON:0000043,2.21e-07,3;UBERON:0007845,2.21e-07,3 | |||
|phase1_expression=2.90685406832891,7.27941781229343,2.53717927372748,10.007329835313,5.81049422755474,8.72338524100369,0,0,1.30592814099919,0.245733936501509,0,0.218441372130172,0.527533956456907,0.37129905888014,1.32558950291166,0.672325146451775,1.20538905604795,0,0.487932798790507,0.246242116153576,0.408001382488506,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,2.89151321907653,2.00535164254356,5.35932120155048,0,2.43317435151318,0.0945348171640679,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,3.47880366186723,1.51956613997496,0.264818361626438,4.87622255272983,0.709336764396714,0,1.06748995729705,1.97334038733728,0,0.134710672069688,0.653847612453835,0.756787138224657,0.576175924479999,0.234321431833797,0,0,1.19558944441441,0.117434498643765,0.323745888736263,0,0,0.368502951935304,0.206651562351531,0,2.22540236350701,0,0,0,0.500474079487857,0,0.877955241761676,1.83892677479412,0.600952235626387,0.226864366320042,0.538168907066586,4.05759038755278,2.33125091275518,3.30100205692843,1.54578793857658,1.03056216018252,2.79175284497385,0.843881661206331,0.68205903612839,2.27190396819703,1.38074847963449,1.13152239773168,2.13005755509969,1.5112814734146,1.18692414617341,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0,0.72995471815166,0,2.57296375277154,0,1.39310378409594,2.16563844500876,0.473227200159376,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0.560655421726804,0.87192013766656,0.5867062865676,0.646358578788889,0,0,1.32969058292435,1.04007436911366,0,0,0,1.42977993658148,0.542621605391443,0,1.30294473717494,1.42156779497018,0.791951872933429,0.904318131178758,0,0.99972991182057,0,0,0,0.958499421966331,1.14861935834114,0,1.15825045334063,1.2328579353023,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,2.50085260529839,1.35632511849868,2.28767947683888,4.46072471992904,2.83864347061082,1.05427273493442,0.902838299183157,0,4.1389228517002,0.664225598535437,0.921845842708516,0.260650843404249,0,0,0,0,0,0,0,0.907170879989041,3.47350930946288,0.920771839728375,3.64858122762996,2.94720043288112,3.58195074346692,4.66476371316462,1.48418066444991,0.771048469013278,1.42049380250502,0.821271560138091,1.03850885836724,1.16210378459959,0,0.802025881213139,0.0920809889358963,1.49258782613989,1.27463817604702,1.70461739447251,0,0.15403067420883,0,0,0.316654886678627,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0.512900250232778,0,0,0.412164046590889,0,0,0,0,4.82051789532479,0.096670718292122,0.308097234229289,0.767518373630648,0,0.644521469209642,0.870100163485371,0.170453254832202,0.534192213880424,0.330569830721956,0.192190067365106,0.127612712494584,0.10115778085555,0,1.5740617341532,0,0.924100740528266,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0.949138274156178,0.953150969619124,0,0.855877976067841,0.318203247925937,0.78494864019923,0.899362287916574,0.823611089208164,0.706874414074119,0.404364963146632,0,0.842516912477962,0,2.19342140668156,1.05650146756755,0.9554993798559,0.848432591722276,1.13008116620243,0.551365343546124,1.32687795048244,1.31535265576129,0,0,0.811641507850816,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,0,0.354761064070598,4.64436797654861,5.59801318031833,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0,0,0,0,0.597743964753209,0,0,0,0,2.17727711363265,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,1.13942055847001,0.23056390438806,0,0.325942115766024,2.23300811812344,0.732780747214898,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0.34945333648406,0.343972064943233,0,0,0,0.193978032976839,0,0.90392296312213,0.137041924646751,0,0,0,0.320635281006135,0.426905989478705,0.39961921916426,0,0,0,0,0.124252535565433,0,0.271808412147228,0.418411385249333,0,0.288950589901519,0,0,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0,0.199679000498991,1.28767814440971,0.223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| ||
|short_description=p@chr3:120115609..120115624,- | |||
}} | }} |
Latest revision as of 14:53, 29 July 2015
Short description: | p@chr3:120115609..120115624, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:120115609..120115624, - |
Coexpression cluster: | C605_hepatic_normal_osteoclastoma_tenocyte_neurofibroma_Ewing_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.02e-16 | 76 |
preadipocyte | 1.27e-11 | 12 |
skin fibroblast | 1.04e-10 | 23 |
fat cell | 1.23e-09 | 15 |
connective tissue cell | 1.45e-09 | 361 |
stromal cell | 2.57e-09 | 28 |
multi fate stem cell | 8.58e-09 | 427 |
mesenchymal cell | 1.65e-08 | 354 |
somatic stem cell | 2.09e-08 | 433 |
GAG secreting cell | 4.34e-08 | 9 |
carbohydrate secreting cell | 4.34e-08 | 9 |
stem cell | 6.54e-08 | 441 |
adipocyte of omentum tissue | 2.17e-07 | 3 |
fibrocyte | 2.21e-07 | 3 |
tendon cell | 2.21e-07 | 3 |
mesenchymal stem cell of adipose | 2.65e-07 | 8 |
omentum preadipocyte | 3.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.77e-13 | 6 |
peritoneum | 5.77e-13 | 6 |
abdominal cavity | 5.77e-13 | 6 |
visceral peritoneum | 5.77e-13 | 6 |
cavity lining | 1.41e-10 | 12 |
serous membrane | 1.41e-10 | 12 |
integument | 1.17e-09 | 46 |
integumental system | 1.17e-09 | 46 |
connective tissue | 2.11e-09 | 371 |
skin of body | 6.48e-09 | 41 |
adipose tissue | 7.42e-09 | 14 |
dense regular connective tissue | 2.21e-07 | 3 |
tendon | 2.21e-07 | 3 |
regular connective tissue | 2.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.19e-07 | 5 |
myotonic disease | 7.19e-07 | 5 |
muscle tissue disease | 7.19e-07 | 5 |
myopathy | 7.19e-07 | 5 |
muscular disease | 7.19e-07 | 5 |
myotonic dystrophy | 7.19e-07 | 5 |