FFCP PHASE1:Hg19::chr3:128204863..128204878,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:128204863..128204878,-
|short_description=p@chr3:128204863..128204878,-
|description=CAGE_peak_at_chr3:128204863..128204878,-
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:128204863..128204878,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr3:128204863..128204878,- | |||
|id=chr3:128204863..128204878,- | |||
|ontology_enrichment_celltype=CL:0002274!2.63e-16!5;CL:0000457!2.63e-16!5;CL:0002191!2.63e-16!5;CL:0000097!2.63e-16!5;CL:0000831!2.63e-16!5;CL:0002028!2.63e-16!5;CL:0000163!7.79e-09!9;CL:0002150!1.17e-08!3;CL:0000861!1.17e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.65e-140;5!CL:0000163;1.98e-78;9!CL:0002591;3.64e-29;1!CL:0000151;2.42e-18;36!CL:0002615;1.14e-10;3!CL:0000766;6.94e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.65e-140,5;CL:0002028,1.65e-140,5;CL:0000163,1.98e-78,9;CL:0002591,3.16e-29,1;CL:0000151,4.78e-20,36;CL:0000839,5.98e-11,66;CL:0000557,8.57e-11,67;CL:0002615,1.20e-10,3;CL:0000766,4.48e-10,72;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.05e-11!31;DOID:1036!5.23e-09!8;DOID:1240!4.73e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.55e-15;2!UBERON:0002012;2.55e-15;2!UBERON:0008886;2.55e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.37e-15,2;UBERON:0007497,2.37e-15,2;UBERON:0003643,2.37e-15,2;UBERON:0003504,2.37e-15,2;UBERON:0003469,2.37e-15,2;UBERON:0003496,2.37e-15,2;UBERON:0002012,2.37e-15,2;UBERON:0008886,2.37e-15,2;UBERON:0007303,2.37e-15,2;UBERON:0002061,2.37e-15,2;UBERON:0005432,2.37e-15,2;UBERON:0004363,2.37e-15,2;UBERON:0004145,1.09e-10,3;UBERON:0002371,1.44e-09,76;UBERON:0001474,6.78e-09,82;UBERON:0004765,3.90e-08,90;UBERON:0002405,6.96e-08,93;UBERON:0002390,1.70e-07,98;UBERON:0003061,1.70e-07,98;UBERON:0001434,2.36e-07,100;UBERON:0003498,6.39e-07,5;UBERON:0005985,6.39e-07,5;UBERON:0002193,7.91e-07,108 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.309157587715317,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,4.92663237895944,2.3773077183571,6.84182781284548,11.5295962733569,6.81709140502452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.718061155278177,0,0.638002319463839,0.0915975934018623,0,0,0.31396051279005,0,0,0.392125068635479,0.167821586975843,0,0.476809736941136,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.309157587715317,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,4.92663237895944,2.3773077183571,6.84182781284548,11.5295962733569,6.81709140502452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.718061155278177,0,0.638002319463839,0.0915975934018623,0,0,0.31396051279005,0,0,0.392125068635479,0.167821586975843,0,0.476809736941136,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.365446585430928,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr3:128204863..128204878,- | |||
}} | }} |
Latest revision as of 15:32, 29 July 2015
Short description: | p@chr3:128204863..128204878, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:128204863..128204878, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.65e-140 | 5 |
basophil mast progenitor cell | 1.65e-140 | 5 |
endocrine cell | 1.98e-78 | 9 |
smooth muscle cell of the pulmonary artery | 3.16e-29 | 1 |
secretory cell | 4.78e-20 | 36 |
myeloid lineage restricted progenitor cell | 5.98e-11 | 66 |
granulocyte monocyte progenitor cell | 8.57e-11 | 67 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
myeloid leukocyte | 4.48e-10 | 72 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.37e-15 | 2 |
developing epithelial placode | 2.37e-15 | 2 |
respiratory system arterial blood vessel | 2.37e-15 | 2 |
respiratory system blood vessel | 2.37e-15 | 2 |
respiratory system artery | 2.37e-15 | 2 |
head blood vessel | 2.37e-15 | 2 |
pulmonary artery | 2.37e-15 | 2 |
pulmonary vascular system | 2.37e-15 | 2 |
pharyngeal vasculature | 2.37e-15 | 2 |
truncus arteriosus | 2.37e-15 | 2 |
aortic sac | 2.37e-15 | 2 |
pharyngeal arch artery | 2.37e-15 | 2 |
outflow tract | 1.09e-10 | 3 |
bone marrow | 1.44e-09 | 76 |
bone element | 6.78e-09 | 82 |
skeletal element | 3.90e-08 | 90 |
immune system | 6.96e-08 | 93 |
hematopoietic system | 1.70e-07 | 98 |
blood island | 1.70e-07 | 98 |
skeletal system | 2.36e-07 | 100 |
heart blood vessel | 6.39e-07 | 5 |
coronary vessel | 6.39e-07 | 5 |
hemolymphoid system | 7.91e-07 | 108 |