FFCP PHASE1:Hg19::chr3:129118992..129118997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:129118992..129118997,+ | |||
|description=CAGE_peak_at_chr3:129118992..129118997,+ | |description=CAGE_peak_at_chr3:129118992..129118997,+ | ||
|id=chr3:129118992..129118997,+ | |id=chr3:129118992..129118997,+ | ||
|ontology_enrichment_celltype=CL:0000097;6.17e-15;5!CL:0002127;2.54e-09;1!CL:0000911;2.54e-09;1!CL:0000814;2.54e-09;1!CL:0000083;6.45e-09;4!CL:0002327;6.45e-09;4!CL:0000163;1.57e-08;9 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;6.17e-15;5!CL:0002127;2.54e-09;1!CL:0000911;2.54e-09;1!CL:0000814;2.54e-09;1!CL:0000083;6.45e-09;4!CL:0002327;6.45e-09;4!CL:0000163;1.57e-08;9 | ||
|ontology_enrichment_disease=DOID:2355;2.54e-09;1!DOID:1749;2.58e-09;14!DOID:1793;6.45e-09;4 | |ontology_enrichment_celltype_v019_2=CL:0000097,7.50e-15,5;CL:0002028,7.50e-15,5;CL:0002127,5.72e-09,1;CL:0000914,5.72e-09,1;CL:0000911,5.72e-09,1;CL:0000814,5.72e-09,1;CL:0002042,5.72e-09,1;CL:0002039,5.72e-09,1;CL:0002040,5.72e-09,1;CL:0002041,5.72e-09,1;CL:0000083,5.97e-09,4;CL:0002327,7.89e-09,4;CL:0000163,1.74e-08,9 | ||
|ontology_enrichment_uberon=UBERON:0001911;6.45e-09;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!1.17e-15!143;DOID:162!6.30e-15!235;DOID:14566!1.21e-14!239;DOID:305!3.32e-12!106;DOID:1749!6.44e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.54e-09;1!DOID:1749;2.58e-09;14!DOID:1793;6.45e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.39e-09,14;DOID:2355,2.55e-09,1;DOID:1793,5.97e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.45e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.89e-09,4;UBERON:0005333,7.89e-09,4;UBERON:0008425,7.89e-09,4;UBERON:0005311,7.89e-09,4 | |||
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| ||
|short_description=p@chr3:129118992..129118997,+ | |short_description=p@chr3:129118992..129118997,+ | ||
}} | }} |
Latest revision as of 15:41, 29 July 2015
Short description: | p@chr3:129118992..129118997, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:129118992..129118997, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.50e-15 | 5 |
basophil mast progenitor cell | 7.50e-15 | 5 |
innate effector T cell | 5.72e-09 | 1 |
immature NK T cell | 5.72e-09 | 1 |
effector T cell | 5.72e-09 | 1 |
mature NK T cell | 5.72e-09 | 1 |
immature NK T cell stage IV | 5.72e-09 | 1 |
immature NK T cell stage I | 5.72e-09 | 1 |
immature NK T cell stage II | 5.72e-09 | 1 |
immature NK T cell stage III | 5.72e-09 | 1 |
epithelial cell of pancreas | 5.97e-09 | 4 |
mammary gland epithelial cell | 7.89e-09 | 4 |
endocrine cell | 1.74e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.89e-09 | 4 |
mammary bud | 7.89e-09 | 4 |
mammary ridge | 7.89e-09 | 4 |
mammary placode | 7.89e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.39e-09 | 14 |
anemia | 2.55e-09 | 1 |
pancreatic cancer | 5.97e-09 | 4 |