FFCP PHASE1:Hg19::chr3:13612325..13612337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:13612325..13612337,+ | |||
|coexpression_cluster_id=C943 | |||
|description=CAGE_peak_at_chr3:13612325..13612337,+ | |description=CAGE_peak_at_chr3:13612325..13612337,+ | ||
|id=chr3:13612325..13612337,+ | |id=chr3:13612325..13612337,+ | ||
|ontology_enrichment_celltype=CL:0000057!6.00e-16!75;CL:0002334!2.93e-11!12;CL:0000055!2.63e-10!180;CL:0000136!4.35e-09!15;CL:0002620!2.24e-08!23 | |ontology_enrichment_celltype=CL:0000057!6.00e-16!75;CL:0002334!2.93e-11!12;CL:0000055!2.63e-10!180;CL:0000136!4.35e-09!15;CL:0002620!2.24e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.22e-24;13!CL:0002334;2.00e-20;12!CL:0002615;2.63e-13;3!CL:0002579;4.56e-13;3!CL:0002521;4.85e-13;3!CL:0002580;1.15e-12;3!CL:0000135;1.52e-12;3!CL:0000388;1.52e-12;3!CL:0002617;1.19e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.72e-21,15;CL:0002334,2.95e-20,12;CL:0000057,3.44e-14,76;CL:0002615,1.90e-13,3;CL:0002579,5.74e-13,3;CL:0002521,5.98e-13,3;CL:0002580,1.34e-12,3;CL:0000135,1.45e-12,3;CL:0000388,1.45e-12,3;CL:0002617,1.30e-09,2;CL:0002320,8.97e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!4.29e-09!45;UBERON:0002416!4.29e-09!45;UBERON:0003688!8.75e-09!6;UBERON:0002358!8.75e-09!6;UBERON:0003684!8.75e-09!6;UBERON:0001178!8.75e-09!6;UBERON:0007100!1.05e-08!27;UBERON:0000948!3.28e-08!24;UBERON:0005498!3.28e-08!24;UBERON:0004140!3.28e-08!24;UBERON:0009881!3.28e-08!24;UBERON:0004141!3.28e-08!24;UBERON:0003084!3.28e-08!24;UBERON:0007005!3.28e-08!24;UBERON:0004139!3.28e-08!24;UBERON:0004291!3.28e-08!24;UBERON:0001013!6.81e-08!14;UBERON:0002072!7.75e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.06e-28;9!UBERON:0000042;3.06e-28;9!UBERON:0003688;1.29e-24;6!UBERON:0002358;1.29e-24;6!UBERON:0003684;1.29e-24;6!UBERON:0001178;1.29e-24;6!UBERON:0001013;3.10e-17;14!UBERON:0000310;2.17e-14;10!UBERON:0002072;3.12e-13;5!UBERON:0002190;4.85e-13;3!UBERON:0001443;5.09e-13;11!UBERON:0007846;1.52e-12;3!UBERON:0000043;1.52e-12;3!UBERON:0007845;1.52e-12;3!UBERON:0005406;1.96e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-24,6;UBERON:0002358,1.18e-24,6;UBERON:0003684,1.18e-24,6;UBERON:0001178,1.18e-24,6;UBERON:0004457,4.57e-21,12;UBERON:0000042,4.57e-21,12;UBERON:0001013,4.86e-17,14;UBERON:0000310,2.30e-14,10;UBERON:0002072,5.21e-13,5;UBERON:0001443,5.34e-13,11;UBERON:0002190,5.98e-13,3;UBERON:0007846,1.45e-12,3;UBERON:0000043,1.45e-12,3;UBERON:0007845,1.45e-12,3;UBERON:0002199,8.80e-10,46;UBERON:0002416,8.80e-10,46;UBERON:0005406,1.42e-09,2;UBERON:0002384,5.64e-07,371 | |||
|phase1_expression=2.36181893051724,6.20891519283851,1.69145284915165,5.00366491765652,6.70441641640932,2.61701557230111,2.53299878168311,3.15859936713415,1.30592814099919,0,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,5.16305917347865,0,0.560677600142307,2.1349799145941,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0.576175924479999,0,0,0,0.298897361103602,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.717558542755448,0.85422955527427,1.48352330811693,1.20036438433761,0.206105058476878,1.54584324027377,1.8611685633159,0.506328996723799,0.68205903612839,1.00973509697646,1.19664868234989,0.80823028409406,0,0.403008392910561,0.508681776931463,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,7.07565032012174,0,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,2.1100756394171,0,2.29937879718731,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.60818530127658,0.783204629850962,1.02943027143257,0,0,0,0,0,0,1.73675465473144,1.07423381301644,3.08726103876381,4.22859192543813,2.55853624533352,1.28683136914886,2.96836132889982,1.07946785661859,0.355123450626254,0.0821271560138091,0,0.581051892299796,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0.95460974377781,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0.66343897524122,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0.709522128141196,1.89996871767898,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,1.17206543417515,0,0,0,0,0.593929361665277,0.307160702099232,1.9882952955326,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,2.89999830173917,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.837847203816763,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0.470531639396343,0,0,1.34329322598187,0.701139929541673,1.10961172300523,0,0.251567901752575,0,1.60188047877847,1.51230923763239,0.310874401165561,0.295710299979268,0,0,0.310525913752519,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,1.0580536810308,1.48798007266701,1.38652688589425,2.59575937274273,0.126166424835079,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.378893491091197,1.60778478093707,0,0.103432995861895,0.426467963801962,0.23806443146374,0.129177819672012,0,0,0.190941474834495,0.202117188958219,0.435433495793923,0,0,0.286888821570705,0.99798106963804,0,0.320182037633146,1.9307228228694,0,0,0,0,0.665756774185513,0.402547587182052,0 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| ||
|short_description=p@chr3:13612325..13612337,+ | |short_description=p@chr3:13612325..13612337,+ | ||
}} | }} |
Latest revision as of 16:10, 29 July 2015
Short description: | p@chr3:13612325..13612337, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13612325..13612337, + |
Coexpression cluster: | C943_Mesenchymal_Preadipocyte_Fibroblast_Adipocyte_Synoviocyte_Hair_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.72e-21 | 15 |
preadipocyte | 2.95e-20 | 12 |
fibroblast | 3.44e-14 | 76 |
adipocyte of omentum tissue | 1.90e-13 | 3 |
omentum preadipocyte | 5.74e-13 | 3 |
subcutaneous fat cell | 5.98e-13 | 3 |
preadipocyte of the breast | 1.34e-12 | 3 |
fibrocyte | 1.45e-12 | 3 |
tendon cell | 1.45e-12 | 3 |
adipocyte of breast | 1.30e-09 | 2 |
connective tissue cell | 8.97e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.18e-24 | 6 |
peritoneum | 1.18e-24 | 6 |
abdominal cavity | 1.18e-24 | 6 |
visceral peritoneum | 1.18e-24 | 6 |
cavity lining | 4.57e-21 | 12 |
serous membrane | 4.57e-21 | 12 |
adipose tissue | 4.86e-17 | 14 |
breast | 2.30e-14 | 10 |
hypodermis | 5.21e-13 | 5 |
chest | 5.34e-13 | 11 |
subcutaneous adipose tissue | 5.98e-13 | 3 |
dense regular connective tissue | 1.45e-12 | 3 |
tendon | 1.45e-12 | 3 |
regular connective tissue | 1.45e-12 | 3 |
integument | 8.80e-10 | 46 |
integumental system | 8.80e-10 | 46 |
perirenal fat | 1.42e-09 | 2 |
connective tissue | 5.64e-07 | 371 |