FFCP PHASE1:Hg19::chr3:170886109..170886115,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:170886109..170886115,+
|short_description=p@chr3:170886109..170886115,+
|description=CAGE_peak_at_chr3:170886109..170886115,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:170886109..170886115,+ | |||
|coexpression_cluster_id=C850 | |||
|description=CAGE_peak_at_chr3:170886109..170886115,+ | |||
|id=chr3:170886109..170886115,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.64e-24!180;CL:0000057!3.50e-17!75;CL:0002371!4.43e-14!591;CL:0000144!7.25e-12!625;CL:0000548!8.50e-10!679;CL:0000004!8.50e-10!679;CL:0000255!8.50e-10!679;CL:0000012!1.64e-09!682;CL:0000048!3.64e-08!430;CL:0000680!3.65e-08!57;CL:0000056!3.65e-08!57;CL:0000355!3.65e-08!57;CL:0000723!6.45e-08!436;CL:0000034!3.37e-07!444;CL:0000183!7.98e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.22e-08;6!CL:0000098;1.22e-08;6!CL:0002167;1.22e-08;6!CL:0000056;1.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.74e-08,6;CL:0000098,1.74e-08,6;CL:0002167,1.74e-08,6;CL:0000515,1.18e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.08e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.62e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.41e-09!83;UBERON:0002329!2.41e-09!83;UBERON:0003077!2.41e-09!83;UBERON:0003059!2.41e-09!83;UBERON:0007282!2.41e-09!83;UBERON:0009618!2.41e-09!83;UBERON:0007285!2.41e-09!83;UBERON:0004290!9.35e-08!70;UBERON:0000486!2.32e-07!82;UBERON:0001134!4.56e-07!61;UBERON:0002036!4.56e-07!61;UBERON:0003082!4.56e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.563817616383885,0,0,0,0,0,0.783556884599516,0,0,0.436882744260345,1.31883489114227,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0.144846518960824,3.1811437882044,11.1926020169606,0,0.221729397462564,0.614843499851882,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,6.95760732373446,0.379891534993739,0.662045904066094,0.286836620748814,3.54668382198357,0.560677600142307,0,2.4666754841716,4.04574346019696,0.404132016209064,0.163461903113459,0.151357427644931,2.30470369792,0.234321431833797,2.49728061464256,0,0.896692083310806,0,0,0.280901613404497,0.61246251376468,0.245668634623536,1.23990937410919,0,0.741800787835671,0,0,0.673344455816265,0,0.554128230968366,1.31693286264251,0.612975591598039,0.751190294532984,0,0.179389635688862,0.427114777637135,2.33125091275518,0.900273288253207,0.309157587715317,0,0.18611685633159,0.843881661206331,0.194874010322397,0,0.460249493211497,0.323292113637624,0,0.302256294682921,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,2.57296375277154,0,3.25057549622385,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0,0.716468181622786,0,0.766765358330422,0,0,0,0,0,0,0.381988425558278,1.17217447210047,5.13217338068116,0,0,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,1.0656887160644,0.285955987316295,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,44.5151763743113,0,1.45579603071565,1.24900292158013,0.946214490203608,1.05427273493442,1.20378439891088,0,6.2083842775503,0.664225598535437,1.84369168541703,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0.30239029332968,1.98486246255021,1.38115775959256,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,0.120859449591622,0.802025881213139,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0.105551628892876,0,0,1.51141141271498,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0.644521469209642,0.435050081742686,0.596586391912706,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0.949138274156178,0.762520775695299,0.255897791311334,1.28381696410176,0,0,0,0,0.471249609382746,0.404364963146632,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,1.31178950409327,0.405820753925408,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0.633322905892992,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,3.22795244566427,0,0,0,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,1.5950057986596,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0.157566364614447,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,3.55924488638614,0.457680136793847,0,0,0,0,2.24901556081802,0,1.65882483136342,0.265841714557995,5.73919567992907,0,1.14241563650639,0,0.363697318405119,0,3.24823631914946,5.17524655308201,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,1.57265941855896,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0.93061915699296,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,1.05868461514708,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.73050624849516,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.09007027562334,0.642301571672949,0.563817616383885,0,0,0,0,0,0.783556884599516,0,0,0.436882744260345,1.31883489114227,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0,0,0.144846518960824,3.1811437882044,11.1926020169606,0,0.221729397462564,0.614843499851882,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,6.95760732373446,0.379891534993739,0.662045904066094,0.286836620748814,3.54668382198357,0.560677600142307,0,2.4666754841716,4.04574346019696,0.404132016209064,0.163461903113459,0.151357427644931,2.30470369792,0.234321431833797,2.49728061464256,0,0.896692083310806,0,0,0.280901613404497,0.61246251376468,0.245668634623536,1.23990937410919,0,0.741800787835671,0,0,0.673344455816265,0,0.554128230968366,1.31693286264251,0.612975591598039,0.751190294532984,0,0.179389635688862,0.427114777637135,2.33125091275518,0.900273288253207,0.309157587715317,0,0.18611685633159,0.843881661206331,0.194874010322397,0,0.460249493211497,0.323292113637624,0,0.302256294682921,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,2.57296375277154,0,3.25057549622385,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,1.44331342025273,0,0.70445216541493,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0,0.716468181622786,0,0.766765358330422,0,0,0,0,0,0,0.381988425558278,1.17217447210047,5.13217338068116,0,0,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,1.0656887160644,0.285955987316295,2.17048642156577,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,1.2328579353023,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,44.5151763743113,0,1.45579603071565,1.24900292158013,0.946214490203608,1.05427273493442,1.20378439891088,0,6.2083842775503,0.664225598535437,1.84369168541703,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0.30239029332968,1.98486246255021,1.38115775959256,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,0.120859449591622,0.802025881213139,0,0.114814448164607,0,0.524497659837696,0,0,0,0,0.105551628892876,0,0,1.51141141271498,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.275673144969061,0.644521469209642,0.435050081742686,0.596586391912706,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0.949138274156178,0.762520775695299,0.255897791311334,1.28381696410176,0,0,0,0,0.471249609382746,0.404364963146632,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,1.31178950409327,0.405820753925408,0.6196469961995,0,0.143411352204052,0.196498082026242,0,0,0.633322905892992,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,3.22795244566427,0,0,0,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,1.5950057986596,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0.157566364614447,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,3.55924488638614,0.457680136793847,0,0,0,0,2.24901556081802,0,1.65882483136342,0.265841714557995,5.73919567992907,0,1.14241563650639,0,0.363697318405119,0,3.24823631914946,5.17524655308201,0,1.03018711554838,1.34699795506368,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,1.57265941855896,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0.93061915699296,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,1.05868461514708,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.73050624849516,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:170886109..170886115,+ | |||
}} | }} |
Latest revision as of 18:13, 29 July 2015
Short description: | p@chr3:170886109..170886115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170886109..170886115, + |
Coexpression cluster: | C850_Nucleus_Osteoblast_Melanocyte_Adipocyte_tenocyte_Placental_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.74e-08 | 6 |
sensory epithelial cell | 1.74e-08 | 6 |
olfactory epithelial cell | 1.74e-08 | 6 |
skeletal muscle myoblast | 1.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.56e-08 | 14 |