FFCP PHASE1:Hg19::chr3:29322380..29322395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:29322380..29322395,- | |||
|description=CAGE_peak_at_chr3:29322380..29322395,- | |description=CAGE_peak_at_chr3:29322380..29322395,- | ||
|id=chr3:29322380..29322395,- | |id=chr3:29322380..29322395,- | ||
|ontology_enrichment_celltype=CL:0000057!2.77e-13!75;CL:0000055!1.91e-12!180;CL:0002620!8.67e-10!23 | |ontology_enrichment_celltype=CL:0000057!2.77e-13!75;CL:0000055!1.91e-12!180;CL:0002620!8.67e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.39e-09;23 | |ontology_enrichment_celltype_v019=CL:0002620;7.39e-09;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.13e-09,23;CL:0000057,3.18e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;2.08e-08;5!DOID:450;2.08e-08;5!DOID:66;2.08e-08;5!DOID:423;2.08e-08;5!DOID:0080000;2.08e-08;5!DOID:11722;2.08e-08;5 | |ontology_enrichment_disease_v019=DOID:17;2.08e-08;5!DOID:450;2.08e-08;5!DOID:66;2.08e-08;5!DOID:423;2.08e-08;5!DOID:0080000;2.08e-08;5!DOID:11722;2.08e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.28e-08,5;DOID:450,2.28e-08,5;DOID:66,2.28e-08,5;DOID:423,2.28e-08,5;DOID:0080000,2.28e-08,5;DOID:11722,2.28e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.72e-13!365;UBERON:0000481!6.65e-11!347;UBERON:0000119!3.05e-08!312;UBERON:0000483!7.84e-08!309;UBERON:0000477!1.51e-07!286;UBERON:0002100!1.53e-07!216;UBERON:0000914!1.64e-07!83;UBERON:0002329!1.64e-07!83;UBERON:0003077!1.64e-07!83;UBERON:0003059!1.64e-07!83;UBERON:0007282!1.64e-07!83;UBERON:0009618!1.64e-07!83;UBERON:0007285!1.64e-07!83;UBERON:0005256!5.37e-07!143;UBERON:0007023!9.67e-07!115 | |ontology_enrichment_uberon=UBERON:0000475!5.72e-13!365;UBERON:0000481!6.65e-11!347;UBERON:0000119!3.05e-08!312;UBERON:0000483!7.84e-08!309;UBERON:0000477!1.51e-07!286;UBERON:0002100!1.53e-07!216;UBERON:0000914!1.64e-07!83;UBERON:0002329!1.64e-07!83;UBERON:0003077!1.64e-07!83;UBERON:0003059!1.64e-07!83;UBERON:0007282!1.64e-07!83;UBERON:0009618!1.64e-07!83;UBERON:0007285!1.64e-07!83;UBERON:0005256!5.37e-07!143;UBERON:0007023!9.67e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.26858963686374,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0.383587685530591,1.80719576192283,0.50133791063589,1.01392563272577,0,0.486634870302636,0.661743720148475,0.665188192387692,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,1.03366703667732,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,1.72101972449288,0.709336764396714,0,0,0.49333509683432,0.622422070799533,2.55950276932407,0.817309515567294,0.302714855289863,0,0,0.312160076830321,0,0.448346041655403,0.587172493218824,0.161872944368132,0.280901613404497,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.453728732640084,0.179389635688862,1.06778694409284,1.69545520927649,2.10063767259082,1.54578793857658,1.28820270022815,1.11670113798954,0.675105328965065,0.292311015483596,1.7670364197088,1.47279837827679,0.646584227275248,1.77504796258307,0.403008392910561,0.339121184620975,0,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,3.11980435583874,4.3299402607582,0,0.469634776943287,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0.4400297149257,0,0,1.690605505112,0.26593811658487,0,0,0,0,1.00084595560703,1.08524321078289,0,1.62868092146868,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,0.500170521059677,0,0.415941723061614,0,1.10391690523754,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.460385919864187,1.12264037773229,0.256278298511402,0,0.804269605718038,1.48418066444991,0.154209693802656,0.177561725313127,0.410635780069046,0.519254429183621,0.464841513839837,0.120859449591622,0.200506470303285,0,0.574072240823034,0.182091168006717,1.31124414959424,0,0,0,0,0.422206515571503,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,1.6068392984416,0,0.154048617114644,0.614014698904518,0.827019434907183,0.214840489736547,0,0.681813019328807,0.0890320356467374,0,0.576570202095319,0,0.10115778085555,5.57814659156743,1.25924938732256,0,0.924100740528266,0,0,0,0.715624433709956,0,0,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0.54907405947211,1.17812402345686,0,0,0.842516912477962,0,4.14312932373184,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0.563391205064483,1.29070216983646,0.392996164052485,0,0,2.53329162357197,1.97576935775941,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0.728163130497081,0,0,0,0,0,0.994147647766298,0.281338832821026,0.556543525114529,0,0,1.79323189425963,0.276283915531148,0,0.409074730008619,0,0,0,0,0,0.591860433821602,0,1.11136990144637,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,1.60515529459758,0.234264445725339,0,0,0,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0.311064574191741,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.698906672968121,0.343972064943233,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0.706049013532002,1.35588444468319,0.411125773940253,0.397429223405979,0.253243183823515,0,0,0.213452994739353,0.19980960958213,0,1.14536596165916,0,0,0.248505071130865,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0.916641696046735,0,0,0.429226048136571,0.669514372325618,0.403100834920358,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.060749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| ||
|short_description=p@chr3:29322380..29322395,- | |short_description=p@chr3:29322380..29322395,- | ||
}} | }} |
Latest revision as of 20:20, 29 July 2015
Short description: | p@chr3:29322380..29322395, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:29322380..29322395, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.13e-09 | 23 |
fibroblast | 3.18e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.28e-08 | 5 |
myotonic disease | 2.28e-08 | 5 |
muscle tissue disease | 2.28e-08 | 5 |
myopathy | 2.28e-08 | 5 |
muscular disease | 2.28e-08 | 5 |
myotonic dystrophy | 2.28e-08 | 5 |