FFCP PHASE1:Hg19::chr3:39093320..39093332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:39093320..39093332,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr3:39093320..39093332,- | |description=CAGE_peak_at_chr3:39093320..39093332,- | ||
|id=chr3:39093320..39093332,- | |id=chr3:39093320..39093332,- | ||
|ontology_enrichment_celltype=CL:0000791!1.20e-23!18;CL:0000789!1.20e-23!18;CL:0002420!1.20e-23!18;CL:0002419!1.20e-23!18;CL:0000790!1.20e-23!18;CL:0000084!2.45e-16!25;CL:0000827!2.45e-16!25;CL:0000624!9.91e-16!6;CL:0000838!4.45e-15!52;CL:0000738!5.35e-15!140;CL:0000542!1.02e-14!53;CL:0000051!1.02e-14!53;CL:0000037!4.46e-14!172;CL:0000566!4.46e-14!172;CL:0000988!6.91e-13!182;CL:0000623!6.99e-13!3;CL:0000825!6.99e-13!3;CL:0000625!3.02e-12!11;CL:0002087!6.07e-12!119;CL:0002032!1.30e-11!165;CL:0000837!1.30e-11!165;CL:0002031!4.82e-10!124;CL:0000094!1.10e-07!8 | |ontology_enrichment_celltype=CL:0000791!1.20e-23!18;CL:0000789!1.20e-23!18;CL:0002420!1.20e-23!18;CL:0002419!1.20e-23!18;CL:0000790!1.20e-23!18;CL:0000084!2.45e-16!25;CL:0000827!2.45e-16!25;CL:0000624!9.91e-16!6;CL:0000838!4.45e-15!52;CL:0000738!5.35e-15!140;CL:0000542!1.02e-14!53;CL:0000051!1.02e-14!53;CL:0000037!4.46e-14!172;CL:0000566!4.46e-14!172;CL:0000988!6.91e-13!182;CL:0000623!6.99e-13!3;CL:0000825!6.99e-13!3;CL:0000625!3.02e-12!11;CL:0002087!6.07e-12!119;CL:0002032!1.30e-11!165;CL:0000837!1.30e-11!165;CL:0002031!4.82e-10!124;CL:0000094!1.10e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.62e-44;3!CL:0002591;2.21e-15;1!CL:0000791;5.60e-13;18!CL:0000789;5.60e-13;18!CL:0002419;5.60e-13;18!CL:0000624;2.52e-10;6!CL:0000084;2.02e-09;25!CL:0000771;1.55e-08;2!CL:0000094;4.66e-08;8!CL:0000542;9.87e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,8.03e-44,3;CL:0000825,8.03e-44,3;CL:0002591,3.17e-15,1;CL:0000838,4.83e-13,52;CL:0000791,5.26e-13,18;CL:0000789,5.26e-13,18;CL:0002420,5.26e-13,18;CL:0002419,5.26e-13,18;CL:0000790,5.26e-13,18;CL:0000542,8.70e-13,53;CL:0000051,8.70e-13,53;CL:0000624,2.29e-10,6;CL:0000084,1.94e-09,25;CL:0000827,1.94e-09,25;CL:0000771,1.61e-08,2;CL:0000094,5.00e-08,8;CL:0000738,1.47e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;5.60e-13;18!CL:0000051;9.87e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.40e-08;2!UBERON:0002012;2.40e-08;2!UBERON:0008886;2.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.87e-08,2;UBERON:0007497,2.87e-08,2;UBERON:0003643,2.87e-08,2;UBERON:0003504,2.87e-08,2;UBERON:0003469,2.87e-08,2;UBERON:0003496,2.87e-08,2;UBERON:0002012,2.87e-08,2;UBERON:0008886,2.87e-08,2;UBERON:0007303,2.87e-08,2;UBERON:0002061,2.87e-08,2;UBERON:0005432,2.87e-08,2;UBERON:0004363,2.87e-08,2 | |||
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| ||
|short_description=p@chr3:39093320..39093332,- | |short_description=p@chr3:39093320..39093332,- | ||
}} | }} |
Latest revision as of 20:47, 29 July 2015
Short description: | p@chr3:39093320..39093332, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:39093320..39093332, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.03e-44 | 3 |
pro-NK cell | 8.03e-44 | 3 |
smooth muscle cell of the pulmonary artery | 3.17e-15 | 1 |
lymphoid lineage restricted progenitor cell | 4.83e-13 | 52 |
mature alpha-beta T cell | 5.26e-13 | 18 |
alpha-beta T cell | 5.26e-13 | 18 |
immature T cell | 5.26e-13 | 18 |
mature T cell | 5.26e-13 | 18 |
immature alpha-beta T cell | 5.26e-13 | 18 |
lymphocyte | 8.70e-13 | 53 |
common lymphoid progenitor | 8.70e-13 | 53 |
CD4-positive, alpha-beta T cell | 2.29e-10 | 6 |
T cell | 1.94e-09 | 25 |
pro-T cell | 1.94e-09 | 25 |
eosinophil | 1.61e-08 | 2 |
granulocyte | 5.00e-08 | 8 |
leukocyte | 1.47e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.87e-08 | 2 |
developing epithelial placode | 2.87e-08 | 2 |
respiratory system arterial blood vessel | 2.87e-08 | 2 |
respiratory system blood vessel | 2.87e-08 | 2 |
respiratory system artery | 2.87e-08 | 2 |
head blood vessel | 2.87e-08 | 2 |
pulmonary artery | 2.87e-08 | 2 |
pulmonary vascular system | 2.87e-08 | 2 |
pharyngeal vasculature | 2.87e-08 | 2 |
truncus arteriosus | 2.87e-08 | 2 |
aortic sac | 2.87e-08 | 2 |
pharyngeal arch artery | 2.87e-08 | 2 |