FFCP PHASE1:Hg19::chr3:6221506..6221523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:6221506..6221523,- | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr3:6221506..6221523,- | |description=CAGE_peak_at_chr3:6221506..6221523,- | ||
|id=chr3:6221506..6221523,- | |id=chr3:6221506..6221523,- | ||
|ontology_enrichment_celltype=CL:0002573!3.85e-17!2;CL:0000064!1.17e-16!3;CL:0005012!1.17e-16!3;CL:0000067!1.17e-16!3;CL:0002304!1.17e-16!3;CL:0000243!1.83e-11!15;CL:0000125!1.83e-11!15;CL:0000030!1.83e-11!15;CL:0000339!1.83e-11!15;CL:0000095!2.79e-10!17;CL:0000123!2.79e-10!17;CL:0000128!1.29e-07!7;CL:0000126!1.29e-07!7;CL:0000127!1.29e-07!7;CL:0002453!1.29e-07!7;CL:1000415!2.74e-07!2;CL:0002319!2.74e-07!25;CL:0000054!3.93e-07!2;CL:0000137!3.93e-07!2;CL:0000092!3.93e-07!2;CL:0001014!4.69e-07!2;CL:0001016!4.69e-07!2 | |ontology_enrichment_celltype=CL:0002573!3.85e-17!2;CL:0000064!1.17e-16!3;CL:0005012!1.17e-16!3;CL:0000067!1.17e-16!3;CL:0002304!1.17e-16!3;CL:0000243!1.83e-11!15;CL:0000125!1.83e-11!15;CL:0000030!1.83e-11!15;CL:0000339!1.83e-11!15;CL:0000095!2.79e-10!17;CL:0000123!2.79e-10!17;CL:0000128!1.29e-07!7;CL:0000126!1.29e-07!7;CL:0000127!1.29e-07!7;CL:0002453!1.29e-07!7;CL:1000415!2.74e-07!2;CL:0002319!2.74e-07!25;CL:0000054!3.93e-07!2;CL:0000137!3.93e-07!2;CL:0000092!3.93e-07!2;CL:0001014!4.69e-07!2;CL:0001016!4.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002573;6.24e-88;2!CL:0000243;1.09e-35;15!CL:0000125;1.09e-35;15!CL:0000095;4.52e-32;17!CL:0002319;5.98e-23;25!CL:0000128;9.89e-11;7!CL:0000126;9.89e-11;7!CL:0000127;9.89e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,6.24e-88,2;CL:0000243,1.09e-35,15;CL:0000125,1.09e-35,15;CL:0000030,1.09e-35,15;CL:0000339,1.09e-35,15;CL:0000095,4.52e-32,17;CL:0000123,4.52e-32,17;CL:0002319,5.98e-23,25;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000128,9.89e-11,7;CL:0000126,9.89e-11,7;CL:0000127,9.89e-11,7;CL:0002453,9.89e-11,7;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.09e-35;15!CL:0000133;3.68e-08;59!UBERON:0006238;2.63e-07;10!CL:0000221;2.93e-07;72 | |||
|ontology_enrichment_disease=DOID:6193!2.32e-13!1;DOID:0060085!5.38e-13!1;DOID:3165!5.38e-13!1;DOID:0060121!5.38e-13!1;DOID:2438!5.38e-13!1;DOID:4418!5.38e-13!1;DOID:201!1.22e-08!6;DOID:0060100!1.22e-08!6;DOID:3350!2.58e-07!2;DOID:200!3.93e-07!2;DOID:4305!3.93e-07!2;DOID:4231!4.98e-07!2;DOID:1907!4.98e-07!2 | |ontology_enrichment_disease=DOID:6193!2.32e-13!1;DOID:0060085!5.38e-13!1;DOID:3165!5.38e-13!1;DOID:0060121!5.38e-13!1;DOID:2438!5.38e-13!1;DOID:4418!5.38e-13!1;DOID:201!1.22e-08!6;DOID:0060100!1.22e-08!6;DOID:3350!2.58e-07!2;DOID:200!3.93e-07!2;DOID:4305!3.93e-07!2;DOID:4231!4.98e-07!2;DOID:1907!4.98e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3093;8.38e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,8.38e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.17e-16!3;UBERON:0001775!1.17e-16!3;UBERON:0000488!9.76e-13!4;UBERON:0002203!8.57e-09!6;UBERON:0001768!8.57e-09!6 | |ontology_enrichment_uberon=UBERON:0001778!1.17e-16!3;UBERON:0001775!1.17e-16!3;UBERON:0000488!9.76e-13!4;UBERON:0002203!8.57e-09!6;UBERON:0001768!8.57e-09!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;2.66e-30;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.66e-30,8;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,3.37486652257111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0.721429382263803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32494003287544,5.36844449982693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,3.37486652257111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0.721429382263803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32494003287544,5.36844449982693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:6221506..6221523,- | |short_description=p@chr3:6221506..6221523,- | ||
}} | }} |
Latest revision as of 23:04, 29 July 2015
Short description: | p@chr3:6221506..6221523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:6221506..6221523, - |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 6.24e-88 | 2 |
glial cell (sensu Vertebrata) | 1.09e-35 | 15 |
glial cell | 1.09e-35 | 15 |
glioblast | 1.09e-35 | 15 |
glioblast (sensu Vertebrata) | 1.09e-35 | 15 |
neuron associated cell | 4.52e-32 | 17 |
neuron associated cell (sensu Vertebrata) | 4.52e-32 | 17 |
neural cell | 5.98e-23 | 25 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
oligodendrocyte | 9.89e-11 | 7 |
macroglial cell | 9.89e-11 | 7 |
astrocyte | 9.89e-11 | 7 |
oligodendrocyte precursor cell | 9.89e-11 | 7 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.66e-30 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 8.38e-07 | 11 |