FFCP PHASE1:Hg19::chr3:8794124..8794140,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:8794124..8794140,-
|short_description=p@chr3:8794124..8794140,-
|description=CAGE_peak_at_chr3:8794124..8794140,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:8794124..8794140,- | |||
|coexpression_cluster_id=C2758 | |||
|description=CAGE_peak_at_chr3:8794124..8794140,- | |||
|id=chr3:8794124..8794140,- | |||
|ontology_enrichment_celltype=CL:0000057!5.31e-15!75;CL:0000077!2.48e-13!19;CL:0000055!3.31e-12!180;CL:0002620!4.51e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.79e-20;23!CL:0000077;8.39e-20;19!CL:0002579;5.20e-08;3!CL:0002615;1.70e-07;3!CL:0000136;2.08e-07;13!CL:0002580;2.73e-07;3!CL:0000197;3.11e-07;6!CL:0000098;3.11e-07;6!CL:0002167;3.11e-07;6!CL:0000057;3.75e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.86e-20,76;CL:0000077,5.63e-20,19;CL:0002620,6.87e-20,23;CL:0002579,5.58e-08,3;CL:0000136,5.66e-08,15;CL:0002615,1.90e-07,3;CL:0002580,2.89e-07,3;CL:0000197,3.16e-07,6;CL:0000098,3.16e-07,6;CL:0002167,3.16e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;2.48e-12;5!DOID:450;2.48e-12;5!DOID:66;2.48e-12;5!DOID:423;2.48e-12;5!DOID:0080000;2.48e-12;5!DOID:11722;2.48e-12;5!DOID:193;1.13e-07;29!DOID:120;5.16e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.66e-12,5;DOID:450,2.66e-12,5;DOID:66,2.66e-12,5;DOID:423,2.66e-12,5;DOID:0080000,2.66e-12,5;DOID:11722,2.66e-12,5;DOID:193,1.07e-07,29;DOID:120,4.77e-07,27 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.81e-14;6!UBERON:0002358;7.81e-14;6!UBERON:0003684;7.81e-14;6!UBERON:0001178;7.81e-14;6!UBERON:0002097;5.20e-10;41!UBERON:0002199;4.03e-09;46!UBERON:0002416;4.03e-09;46!UBERON:0004457;6.25e-09;9!UBERON:0000042;6.25e-09;9!UBERON:0000310;2.83e-07;10!UBERON:0002118;7.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.37e-14,6;UBERON:0002358,9.37e-14,6;UBERON:0003684,9.37e-14,6;UBERON:0001178,9.37e-14,6;UBERON:0002097,1.39e-12,41;UBERON:0002199,4.23e-12,46;UBERON:0002416,4.23e-12,46;UBERON:0000310,3.01e-07,10;UBERON:0002118,6.55e-07,5 | |||
|phase1_expression=2.18014055124668,4.71021152560163,3.66481450649525,10.007329835313,4.02264984984559,4.36169262050184,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,2.19093027116212,0.975865597581014,0,0.204000691244253,0,0.572471974262113,0.684372125364421,0.627713197974014,0.382067028739756,1.06730766284929,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4182426957736,0.759783069987479,0.662045904066094,1.72101972449288,1.77334191099179,0,0,3.7000132262574,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,1.23633464639278,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,2.45190236639216,0.150238058906597,0.907457465280168,30.4962380671065,6.40672166455702,8.26534414522291,13.8041904198825,5.04957393268351,11.8514648420989,7.81690796592677,11.6455669246474,5.94365731483312,11.3595198409852,1.47279837827679,0.323292113637624,14.2003837006646,5.23910910783729,11.1909990924922,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,15.4377825166292,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0.517086863031111,0,0,9.57377219705534,15.6011155367049,0,0,0,0.714889968290738,0,0,0,0,0,0.301439377059586,0,1.49959486773086,0,0,2.10833939483032,0.479249710983165,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,70.2941511974128,124.543434180419,70.1775746901009,15.2283839490527,0,0,0,0.664225598535437,0,0.868836144680828,0,0,0,0.215714200818617,0,0,0,0,4.21783273291921,4.60385919864187,3.36792113319688,4.22859192543813,11.2575594794675,26.8626048309825,0,0.462629081407967,0.532685175939381,0,0,0.232420756919918,0,0,0,0,0.910455840033585,0.262248829918848,0,0,0,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0.512900250232778,0.984043937099117,1.95227036798582,0,0.183138929636687,0.082509499920588,0,0,4.82051789532479,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,1.14378116354295,0.255897791311334,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,1.36499911407986,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0,0,0.717056761020258,0.392996164052485,0,0,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0.313359791546046,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.445234820091624,0,0,0,0,1.25966373927138,0.20453736500431,1.35393286007176,18.3513356720466,0.629078458031288,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,2.17499872630438,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.361789315876224,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,2.3209787098083,0,0,0,0,0,0,0,0,0.730953646538188,0,0,0,0,0,0,0,0,0.91821828489147,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.416024019039416,1.73559738335131,0,0.435296032902013,0,4.1276647793188,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0.391102765469606,0,0,0.39961921916426,0,0,0.343189995723929,0.432164393964449,0,0,4.07712618220842,3.13808538937,0,0,0,0,0,2.14882720709979,0.262887354279314,0,0,0,0,0,0,0,5.40449825313605,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.136203406111576,0,0.412618309791701,0,0,0,0,0,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,8.64221491201268,0,0,0.492555124496034,1.02232813071253,0.113312091520126,0,0,0.775697738169303,0.66116300871345,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.3755727921195,0.573409195690071,0,0.124192805882767,0.276697269872462,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0.453692771289717,0,0,0.63718706865481,0,0.155262956876259,0.829412415681711,5.3168342911599,3.1304703708704,0.150257608997218,1.52322084867518,2.84809513243263,1.27294061441792,0.966695013382396,1.85613503951397,6.76763010787647,3.20022211730523,0,1.34699795506368,0,0.963099152036517,2.57329909649911,3.91491437947817,28.5649466145463,29.4033542391269,3.91578727210348,62.5020055374391,0.308801447160972,4.82424909073156,25.6199261621528,7.33073345429476,1.18259708457151,0.76872455576384,1.72715170865599,1.8231597370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| ||
|short_description=p@chr3:8794124..8794140,- | |||
}} | }} |
Latest revision as of 23:49, 29 July 2015
Short description: | p@chr3:8794124..8794140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:8794124..8794140, - |
Coexpression cluster: | C2758_Olfactory_mesothelioma_Fibroblast_Preadipocyte_basal_Hair_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.86e-20 | 76 |
mesothelial cell | 5.63e-20 | 19 |
skin fibroblast | 6.87e-20 | 23 |
omentum preadipocyte | 5.58e-08 | 3 |
fat cell | 5.66e-08 | 15 |
adipocyte of omentum tissue | 1.90e-07 | 3 |
preadipocyte of the breast | 2.89e-07 | 3 |
receptor cell | 3.16e-07 | 6 |
sensory epithelial cell | 3.16e-07 | 6 |
olfactory epithelial cell | 3.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.37e-14 | 6 |
peritoneum | 9.37e-14 | 6 |
abdominal cavity | 9.37e-14 | 6 |
visceral peritoneum | 9.37e-14 | 6 |
skin of body | 1.39e-12 | 41 |
integument | 4.23e-12 | 46 |
integumental system | 4.23e-12 | 46 |
breast | 3.01e-07 | 10 |
right ovary | 6.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.66e-12 | 5 |
myotonic disease | 2.66e-12 | 5 |
muscle tissue disease | 2.66e-12 | 5 |
myopathy | 2.66e-12 | 5 |
muscular disease | 2.66e-12 | 5 |
myotonic dystrophy | 2.66e-12 | 5 |
reproductive organ cancer | 1.07e-07 | 29 |
female reproductive organ cancer | 4.77e-07 | 27 |