FFCP PHASE1:Hg19::chr3:9908708..9908727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:9908708..9908727,- | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_at_chr3:9908708..9908727,- | |description=CAGE_peak_at_chr3:9908708..9908727,- | ||
|id=chr3:9908708..9908727,- | |id=chr3:9908708..9908727,- | ||
|ontology_enrichment_celltype=CL:0000136!2.98e-45!15;CL:0002521!1.29e-18!3;CL:0000325!4.48e-16!39;CL:0002617!1.67e-12!2;CL:0002615!9.08e-09!3 | |ontology_enrichment_celltype=CL:0000136!2.98e-45!15;CL:0002521!1.29e-18!3;CL:0000325!4.48e-16!39;CL:0002617!1.67e-12!2;CL:0002615!9.08e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.26e-107;13!CL:0002521;1.74e-36;3!CL:0002617;5.68e-24;2!CL:0002615;1.32e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.18e-93,15;CL:0002521,1.64e-36,3;CL:0002617,6.02e-24,2;CL:0002615,1.27e-16,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!1.29e-18!3;UBERON:0002072!2.28e-11!5;UBERON:0006122!2.66e-07!1;UBERON:0007029!4.78e-07!1;UBERON:0000989!5.69e-07!1;UBERON:0008811!5.69e-07!1;UBERON:0006258!5.69e-07!1;UBERON:0005876!5.69e-07!1;UBERON:0004874!5.69e-07!1;UBERON:0001013!6.10e-07!14;UBERON:0001831!6.76e-07!1;UBERON:0001567!6.76e-07!1;UBERON:0008801!6.76e-07!1;UBERON:0001301!9.51e-07!1 | |ontology_enrichment_uberon=UBERON:0002190!1.29e-18!3;UBERON:0002072!2.28e-11!5;UBERON:0006122!2.66e-07!1;UBERON:0007029!4.78e-07!1;UBERON:0000989!5.69e-07!1;UBERON:0008811!5.69e-07!1;UBERON:0006258!5.69e-07!1;UBERON:0005876!5.69e-07!1;UBERON:0004874!5.69e-07!1;UBERON:0001013!6.10e-07!14;UBERON:0001831!6.76e-07!1;UBERON:0001567!6.76e-07!1;UBERON:0008801!6.76e-07!1;UBERON:0001301!9.51e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.74e-36;3!UBERON:0002072;3.45e-22;5!UBERON:0001013;6.65e-14;14!UBERON:0007029;8.15e-13;1!UBERON:0000310;4.31e-11;10!UBERON:0001443;3.91e-10;11!UBERON:0003688;9.09e-09;6!UBERON:0002358;9.09e-09;6!UBERON:0003684;9.09e-09;6!UBERON:0001178;9.09e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.64e-36,3;UBERON:0002072,3.33e-22,5;UBERON:0001013,6.54e-14,14;UBERON:0007029,8.64e-13,1;UBERON:0000310,4.31e-11,10;UBERON:0001443,3.91e-10,11;UBERON:0003688,8.91e-09,6;UBERON:0002358,8.91e-09,6;UBERON:0003684,8.91e-09,6;UBERON:0001178,8.91e-09,6 | |||
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|short_description=p@chr3:9908708..9908727,- | |short_description=p@chr3:9908708..9908727,- | ||
}} | }} |
Latest revision as of 00:10, 30 July 2015
Short description: | p@chr3:9908708..9908727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:9908708..9908727, - |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr3:9908708..9908727- |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.18e-93 | 15 |
subcutaneous fat cell | 1.64e-36 | 3 |
adipocyte of breast | 6.02e-24 | 2 |
adipocyte of omentum tissue | 1.27e-16 | 3 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.64e-36 | 3 |
hypodermis | 3.33e-22 | 5 |
adipose tissue | 6.54e-14 | 14 |
surface | 8.64e-13 | 1 |
breast | 4.31e-11 | 10 |
chest | 3.91e-10 | 11 |
omentum | 8.91e-09 | 6 |
peritoneum | 8.91e-09 | 6 |
abdominal cavity | 8.91e-09 | 6 |
visceral peritoneum | 8.91e-09 | 6 |
Showing 1 to 10 of 10 entries