FFCP PHASE1:Hg19::chr3:99508258..99508268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99508258..99508268,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr3:99508258..99508268,- | |description=CAGE_peak_at_chr3:99508258..99508268,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!7.92e-15!23;CL:0000136!9.83e-11!15;CL:0002617!4.04e-10!2;CL:0000055!4.21e-09!180;CL:0000057!4.60e-09!75;CL:0002615!2.37e-07!3;CL:0002579!4.26e-07!3;CL:0002580!5.61e-07!3 | |ontology_enrichment_celltype=CL:0002620!7.92e-15!23;CL:0000136!9.83e-11!15;CL:0002617!4.04e-10!2;CL:0000055!4.21e-09!180;CL:0000057!4.60e-09!75;CL:0002615!2.37e-07!3;CL:0002579!4.26e-07!3;CL:0002580!5.61e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0002620;1.17e-09;23!CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |ontology_enrichment_celltype_v019=CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0002620;1.17e-09;23!CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.29e-13,4;CL:0002547,1.29e-13,4;CL:0002620,1.12e-09,23;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!9.58e-15!5;DOID:450!9.58e-15!5;DOID:66!9.58e-15!5;DOID:423!9.58e-15!5;DOID:0080000!9.58e-15!5;DOID:11722!9.58e-15!5 | |ontology_enrichment_disease=DOID:17!9.58e-15!5;DOID:450!9.58e-15!5;DOID:66!9.58e-15!5;DOID:423!9.58e-15!5;DOID:0080000!9.58e-15!5;DOID:11722!9.58e-15!5 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:17;3.26e-11;5!DOID:450;3.26e-11;5!DOID:66;3.26e-11;5!DOID:423;3.26e-11;5!DOID:0080000;3.26e-11;5!DOID:11722;3.26e-11;5!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:17;3.26e-11;5!DOID:450;3.26e-11;5!DOID:66;3.26e-11;5!DOID:423;3.26e-11;5!DOID:0080000;3.26e-11;5!DOID:11722;3.26e-11;5!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:17,2.94e-11,5;DOID:450,2.94e-11,5;DOID:66,2.94e-11,5;DOID:423,2.94e-11,5;DOID:0080000,2.94e-11,5;DOID:11722,2.94e-11,5;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.53e-13!6;UBERON:0002358!8.53e-13!6;UBERON:0003684!8.53e-13!6;UBERON:0001178!8.53e-13!6;UBERON:0002097!8.36e-12!40;UBERON:0002199!2.98e-10!45;UBERON:0002416!2.98e-10!45;UBERON:0000310!1.92e-07!10;UBERON:0001443!9.04e-07!11 | |ontology_enrichment_uberon=UBERON:0003688!8.53e-13!6;UBERON:0002358!8.53e-13!6;UBERON:0003684!8.53e-13!6;UBERON:0001178!8.53e-13!6;UBERON:0002097!8.36e-12!40;UBERON:0002199!2.98e-10!45;UBERON:0002416!2.98e-10!45;UBERON:0000310!1.92e-07!10;UBERON:0001443!9.04e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4 | |ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0000415,1.29e-13,4;UBERON:0007240,1.29e-13,4;UBERON:0005742,1.29e-13,4;UBERON:0005734,1.29e-13,4;UBERON:0004664,1.29e-13,4;UBERON:0004663,1.29e-13,4;UBERON:0004797,2.35e-08,7 | |||
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|short_description=p@chr3:99508258..99508268,- | |short_description=p@chr3:99508258..99508268,- | ||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p@chr3:99508258..99508268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99508258..99508268, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.29e-13 | 4 |
fibroblast of the aortic adventitia | 1.29e-13 | 4 |
skin fibroblast | 1.12e-09 | 23 |
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
artery wall | 1.29e-13 | 4 |
tunica adventitia of artery | 1.29e-13 | 4 |
adventitia | 1.29e-13 | 4 |
tunica adventitia of blood vessel | 1.29e-13 | 4 |
aorta tunica adventitia | 1.29e-13 | 4 |
aorta wall | 1.29e-13 | 4 |
blood vessel layer | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
musculoskeletal system disease | 2.94e-11 | 5 |
myotonic disease | 2.94e-11 | 5 |
muscle tissue disease | 2.94e-11 | 5 |
myopathy | 2.94e-11 | 5 |
muscular disease | 2.94e-11 | 5 |
myotonic dystrophy | 2.94e-11 | 5 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |