FFCP PHASE1:Hg19::chr4:100859250..100859255,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:100859250..100859255,-
|short_description=p@chr4:100859250..100859255,-
|description=CAGE_peak_at_chr4:100859250..100859255,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:100859250..100859255,- | |||
|description=CAGE_peak_at_chr4:100859250..100859255,- | |||
|id=chr4:100859250..100859255,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.24e-08;25!CL:0002127;4.28e-07;1!CL:0000785;4.28e-07;1!CL:0000911;4.28e-07;1!CL:0000819;4.28e-07;1!CL:0000814;4.28e-07;1!CL:0000542;7.47e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.83e-09,52;CL:0000542,6.13e-09,53;CL:0000051,6.13e-09,53;CL:0000084,1.29e-07,25;CL:0000827,1.29e-07,25;CL:0002127,3.60e-07,1;CL:0000914,3.60e-07,1;CL:0000911,3.60e-07,1;CL:0000814,3.60e-07,1;CL:0002042,3.60e-07,1;CL:0002039,3.60e-07,1;CL:0002040,3.60e-07,1;CL:0002041,3.60e-07,1;CL:0000819,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.47e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.28e-07;1!DOID:0060073;4.28e-07;1!DOID:8675;4.28e-07;1!DOID:3149;4.28e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.73e-07,1;DOID:8675,7.73e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.28e-07;1!UBERON:0000029;4.28e-07;1!UBERON:0002038;4.28e-07;1!UBERON:0002426;4.28e-07;1!UBERON:0003831;4.28e-07;1!UBERON:0003898;4.28e-07;1!UBERON:0004830;4.28e-07;1!UBERON:0009661;4.28e-07;1!UBERON:0002950;4.28e-07;1!UBERON:0003830;4.28e-07;1!UBERON:0005175;4.28e-07;1!UBERON:0001774;4.28e-07;1!UBERON:0001103;4.28e-07;1!UBERON:0001891;4.28e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.23e-07,1;UBERON:0003831,2.23e-07,1;UBERON:0003898,2.23e-07,1;UBERON:0004830,2.23e-07,1;UBERON:0003830,2.23e-07,1;UBERON:0005175,2.23e-07,1;UBERON:0001774,2.23e-07,1;UBERON:0001103,2.23e-07,1;UBERON:0010084,2.23e-07,1;UBERON:0000029,2.52e-07,1;UBERON:0007029,3.01e-07,1;UBERON:0002038,5.78e-07,1;UBERON:0009661,5.78e-07,1;UBERON:0002950,5.78e-07,1;UBERON:0001891,5.78e-07,1;UBERON:0009616,5.78e-07,1;UBERON:0010286,5.78e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.458480434487708,0.246301768349837,0.236132343941038,0,0.383829398097213,0,0,0,0,0.542270404062111,1.13735385989937,0.587200878669695,1.10799081706375,0.200544447470142,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0.755751887377619,0.485168122375632,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0.570025487482497,0.99458338599545,0.365328307529268,0,0.546138611262131,1.77901850772711,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0.983548850569165,0.393010762749165,1.23360899399706,0.334372990781356,0,0,0,0.445641827540694,0.294605907474837,1.10766947291811,0,1.0247305578054,0.390178042679635,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0,0,0.566546713487831,0.766440987203842,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0.821127996921047,0.201606743224732,1.60464117470104,1.01377082717959,2.43806866313962,0,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.714397826272638,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0.37223371266318,0.506328996723799,0,0.757301322732344,0.184099797284599,0.484938170456436,0,0.10075209822764,0,0,0,0,0.487894824518382,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0,0.179117045405697,0,0,0,0.176096868026452,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,1.34502172792233,0.197030760201927,1.2937654491571,0.641715181398742,0,1.30139853857622,0.773288812777695,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.431428401637234,0.74709290462411,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.460404944679482,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.537101224341368,0.145016693914229,0.255679882248303,0.0890320356467374,0.165284915360978,0.576570202095319,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0.238231775457789,1.64544909234478,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.711418433484141,0.318852545457645,0,0,0.423347165447766,0,0,0.456469358066384,0,0,1.18504244461122,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0.166849141711909,0.390776190804081,0,0,0.540911356951966,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.445234820091624,0,5.06700979507184,1.39473591775749,0.276283915531148,0,0.511343412510774,0,0.311039587661807,0,0.179021174675609,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.699679999969566,0,0.568967241427498,0.254253650292766,0.472775363535873,0.344743373241465,1.45802306691627,0.173624994933292,0.885741385813839,0.120596438625408,0,0.552896299656123,1.47773809476774,0,0.32681539055697,0.557694977114413,0.307801034015188,0,0,0.179515288819544,0.325942115766024,0,0,0,1.02193298195737,0,0.332423363800313,0,0.392125068635479,0,0.75901493089674,0.317873157960757,0.210998064528027,0.489698424477443,0.141353071433941,0.216388639742091,0.995261931078505,0.619202951523374,0.611030144933625,0.889563386041866,0.370691816839509,0.104421949505455,0.067401132980677,1.60515529459758,0.468528891450678,1.094728735294,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| ||
|short_description=p@chr4:100859250..100859255,- | |||
}} | }} |
Latest revision as of 00:20, 30 July 2015
Short description: | p@chr4:100859250..100859255, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:100859250..100859255, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.83e-09 | 52 |
lymphocyte | 6.13e-09 | 53 |
common lymphoid progenitor | 6.13e-09 | 53 |
T cell | 1.29e-07 | 25 |
pro-T cell | 1.29e-07 | 25 |
innate effector T cell | 3.60e-07 | 1 |
immature NK T cell | 3.60e-07 | 1 |
effector T cell | 3.60e-07 | 1 |
mature NK T cell | 3.60e-07 | 1 |
immature NK T cell stage IV | 3.60e-07 | 1 |
immature NK T cell stage I | 3.60e-07 | 1 |
immature NK T cell stage II | 3.60e-07 | 1 |
immature NK T cell stage III | 3.60e-07 | 1 |
B-1 B cell | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.23e-07 | 1 |
respiratory system muscle | 2.23e-07 | 1 |
skeletal muscle of trunk | 2.23e-07 | 1 |
respiratory system skeletal muscle | 2.23e-07 | 1 |
thoracic segment muscle | 2.23e-07 | 1 |
chest organ | 2.23e-07 | 1 |
muscle of trunk | 2.23e-07 | 1 |
diaphragm | 2.23e-07 | 1 |
future diaphragm | 2.23e-07 | 1 |
lymph node | 2.52e-07 | 1 |
surface | 3.01e-07 | 1 |
substantia nigra | 5.78e-07 | 1 |
midbrain nucleus | 5.78e-07 | 1 |
regional part of midbrain | 5.78e-07 | 1 |
midbrain | 5.78e-07 | 1 |
presumptive midbrain | 5.78e-07 | 1 |
midbrain neural tube | 5.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.73e-07 | 1 |
lymphosarcoma | 7.73e-07 | 1 |