FFCP PHASE1:Hg19::chr4:157298235..157298246,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:157298235..157298246,- | |||
|description=CAGE_peak_at_chr4:157298235..157298246,- | |||
|id=chr4:157298235..157298246,- | |||
|ontology_enrichment_celltype=CL:0000064!1.01e-16!3;CL:0005012!1.01e-16!3;CL:0000067!1.01e-16!3;CL:0002304!1.01e-16!3;CL:0000055!1.91e-11!180;CL:0000133!5.59e-09!59;CL:0002573!7.79e-09!2;CL:0000062!8.28e-09!11;CL:0000375!8.28e-09!11;CL:0000335!8.28e-09!11;CL:0000346!8.73e-09!3;CL:1000428!8.73e-09!3;CL:0002568!3.17e-07!1;CL:0000221!3.55e-07!71;CL:0000342!7.15e-07!1;CL:0002565!7.15e-07!1;CL:0002559!8.75e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002573;5.61e-30;2!CL:0002568;4.10e-23;1!CL:0000062;7.21e-23;9!CL:0000243;3.03e-12;15!CL:0000125;3.03e-12;15!CL:0000095;5.01e-11;17!CL:0000346;1.30e-08;3!CL:1000428;1.30e-08;3!CL:0002319;6.06e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,5.61e-30,2;CL:0002568,5.13e-23,1;CL:0000062,7.22e-19,11;CL:0000375,7.22e-19,11;CL:0000335,7.22e-19,11;CL:0000243,2.92e-12,15;CL:0000125,2.92e-12,15;CL:0000030,2.92e-12,15;CL:0000339,2.92e-12,15;CL:0000095,4.84e-11,17;CL:0000123,4.84e-11,17;CL:0000346,1.30e-08,3;CL:1000428,1.30e-08,3;CL:0000333,1.54e-08,41;CL:0002319,5.91e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000335;7.44e-19;11!CL:0000339;3.03e-12;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!7.11e-22!4;UBERON:0001778!1.01e-16!3;UBERON:0001775!1.01e-16!3;UBERON:0002203!1.17e-14!6;UBERON:0001768!1.17e-14!6;UBERON:0007625!4.11e-12!11;UBERON:0001801!1.79e-09!14;UBERON:0000412!8.73e-09!3;UBERON:0001992!8.73e-09!3;UBERON:0005085!1.77e-08!29;UBERON:0002200!4.64e-08!11;UBERON:0006876!4.64e-08!11;UBERON:0000019!6.38e-07!19;UBERON:0000047!6.38e-07!19;UBERON:0004088!6.38e-07!19;UBERON:0003072!6.38e-07!19;UBERON:0003071!6.38e-07!19;UBERON:0004128!6.38e-07!19;UBERON:0002506!7.15e-07!1;UBERON:0001769!7.15e-07!1;UBERON:0002073!8.75e-07!4;UBERON:0005086!8.75e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.07e-10;8!UBERON:0000412;1.30e-08;3!UBERON:0001992;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.07e-10,8;UBERON:0000412,1.30e-08,3;UBERON:0001992,1.30e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,3.1811437882044,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,1.55126058909333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93022287418699,3.87794649626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89331201168905,1.19298766662821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:157298235..157298246,- | |||
}} |
Latest revision as of 02:40, 30 July 2015
Short description: | p@chr4:157298235..157298246, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:157298235..157298246, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 5.61e-30 | 2 |
mesenchymal stem cell of Wharton's jelly | 5.13e-23 | 1 |
osteoblast | 7.22e-19 | 11 |
osteoprogenitor cell | 7.22e-19 | 11 |
mesenchyme condensation cell | 7.22e-19 | 11 |
glial cell (sensu Vertebrata) | 2.92e-12 | 15 |
glial cell | 2.92e-12 | 15 |
glioblast | 2.92e-12 | 15 |
glioblast (sensu Vertebrata) | 2.92e-12 | 15 |
neuron associated cell | 4.84e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 4.84e-11 | 17 |
hair follicle dermal papilla cell | 1.30e-08 | 3 |
stem cell of epidermis | 1.30e-08 | 3 |
migratory neural crest cell | 1.54e-08 | 41 |
neural cell | 5.91e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.07e-10 | 8 |
dermal papilla | 1.30e-08 | 3 |
papillary layer of dermis | 1.30e-08 | 3 |