FFCP PHASE1:Hg19::chr4:5821876..5821888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:5821876..5821888,+ | |||
|description=CAGE_peak_at_chr4:5821876..5821888,+ | |description=CAGE_peak_at_chr4:5821876..5821888,+ | ||
|id=chr4:5821876..5821888,+ | |id=chr4:5821876..5821888,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.45e-14!75;CL:0000055!6.18e-14!180;CL:0002620!3.49e-11!23 | |ontology_enrichment_celltype=CL:0000057!5.45e-14!75;CL:0000055!6.18e-14!180;CL:0002620!3.49e-11!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.62e-15;23!CL:0002334;5.25e-07;12 | |ontology_enrichment_celltype_v019=CL:0002620;4.62e-15;23!CL:0002334;5.25e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.99e-15,23;CL:0000057,3.51e-13,76;CL:0002334,2.42e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.72e-07!14 | |ontology_enrichment_disease=DOID:2394!2.72e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.40e-10;14!DOID:17;1.07e-08;5!DOID:450;1.07e-08;5!DOID:66;1.07e-08;5!DOID:423;1.07e-08;5!DOID:0080000;1.07e-08;5!DOID:11722;1.07e-08;5 | |ontology_enrichment_disease_v019=DOID:2394;1.40e-10;14!DOID:17;1.07e-08;5!DOID:450;1.07e-08;5!DOID:66;1.07e-08;5!DOID:423;1.07e-08;5!DOID:0080000;1.07e-08;5!DOID:11722;1.07e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-10,14;DOID:17,8.36e-09,5;DOID:450,8.36e-09,5;DOID:66,8.36e-09,5;DOID:423,8.36e-09,5;DOID:0080000,8.36e-09,5;DOID:11722,8.36e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.85e-12!95;UBERON:0002097!1.63e-09!40;UBERON:0002199!4.17e-09!45;UBERON:0002416!4.17e-09!45;UBERON:0000475!6.22e-07!365 | |ontology_enrichment_uberon=UBERON:0003102!7.85e-12!95;UBERON:0002097!1.63e-09!40;UBERON:0002199!4.17e-09!45;UBERON:0002416!4.17e-09!45;UBERON:0000475!6.22e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0002097;9.38e-08;41!UBERON:0002199;2.86e-07;46!UBERON:0002416;2.86e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.02e-10;9!UBERON:0000042;1.02e-10;9!UBERON:0002097;9.38e-08;41!UBERON:0002199;2.86e-07;46!UBERON:0002416;2.86e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.30e-10,41;UBERON:0002199,2.08e-09,46;UBERON:0002416,2.08e-09,46;UBERON:0004457,2.51e-07,12;UBERON:0000042,2.51e-07,12;UBERON:0004458,6.32e-07,49 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.40954404095971,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.247532705920093,0.331397375727916,1.34465029290355,0.602694528023977,0,0,0.369363174230364,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.993374274723366,0.410502947249729,0.708397031823113,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0,2.53007406669196,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0.850813354476611,1.10864698731282,0.527008714158756,0.261958150995425,0.364295288292542,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,2.1185468930115,5.44989579422746,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.67355336034844,0.817309515567294,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,1.64393548606981,0.822041490506354,1.13311061057692,0.842704840213491,0.408308342509787,0.737005903870608,0.309977343527296,0,0.989067717114227,0,0,1.0100166837244,0.875829639103749,0,0.877955241761676,0.30648779579902,0.300476117813194,0.340296549480063,3.58779271377724,2.56268866582281,1.27159140695737,2.40072876867522,1.54578793857658,3.34932702059318,2.23340227597908,2.36286865137773,1.26668106709558,6.56327813034698,1.01254888506529,1.61646056818812,3.19508633264953,0.705264687593482,1.3564847384839,0.57978255948989,1.63647672354501,0.286804595389004,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0.118306800039844,0,0.723033089650446,0.220587945464788,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.768251997860379,0,0.703702806881416,0.648119116109707,0.325808305310325,0,0,0.463721619900307,0,0,0.462985512576611,0,0,0,0,0,0.445893486866185,0,1.00789276919316,0.708875486211932,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0.380987365753014,0,0,0,0.822619941626588,0.901029173531752,0.857479297891735,0.224262168690721,0.43596006883328,0.1466765716419,0.517086863031111,0,0.845302752556,1.06375246633948,2.08014873822732,0.514414748524284,0,0,1.14382394926518,0,0.823240336780769,0,1.06617584622764,0.791951872933429,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,3.49309748335652,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,0.271265023699736,4.78332981520856,2.14114786556594,2.52323864054295,1.40569697991256,0.300946099727719,0,0,0,0,1.73767228936166,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,1.84154367945675,1.12264037773229,0.768834895534206,2.04682899626681,1.28683136914886,0,1.85051632563187,0.710246901252508,1.56041596426237,1.55776328755086,0.232420756919918,0,0.40101294060657,0.828728900423067,0.68888668898764,1.82091168006717,0.786746489756545,0,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0.48335359146061,0.154048617114644,0.614014698904518,0.689182862422653,1.28904293841928,0.870100163485371,0.511359764496605,0.445160178233687,0.330569830721956,0,2.4246415373971,0.30347334256665,0.464845549297286,1.5740617341532,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0,1.61885211824983,0.823611089208164,0.706874414074119,0,0,0.421258456238981,0,1.21856744815642,0,0.9554993798559,2.82810863907426,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.7133421029625,0.354761064070598,3.37772216476263,3.29294892959902,0.379473173765715,0,0.288666338176536,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0.432807638929335,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0,0.242721043499027,1.78309414843965,0.284136146806413,0,0.593929361665277,1.22864280839693,0,0.140669416410513,3.7844959707788,0.16480387422676,1.47787785689595,1.59398390600856,0,0.251932747854276,0.920418142519393,0.369254416383208,3.11039587661807,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0,0,0.291604613383254,0.520874984799877,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.538651809526579,3.19037756371603,0,0.359030577639089,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,1.48260564340311,0.370691816839509,0.939797545549098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|phase1_expression=1.2717486548939,0.856402095563933,1.40954404095971,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0.436882744260345,0,0.247532705920093,0.331397375727916,1.34465029290355,0.602694528023977,0,0,0.369363174230364,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.993374274723366,0.410502947249729,0.708397031823113,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0,2.53007406669196,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0.850813354476611,1.10864698731282,0.527008714158756,0.261958150995425,0.364295288292542,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,2.1185468930115,5.44989579422746,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.67355336034844,0.817309515567294,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,0,1.64393548606981,0.822041490506354,1.13311061057692,0.842704840213491,0.408308342509787,0.737005903870608,0.309977343527296,0,0.989067717114227,0,0,1.0100166837244,0.875829639103749,0,0.877955241761676,0.30648779579902,0.300476117813194,0.340296549480063,3.58779271377724,2.56268866582281,1.27159140695737,2.40072876867522,1.54578793857658,3.34932702059318,2.23340227597908,2.36286865137773,1.26668106709558,6.56327813034698,1.01254888506529,1.61646056818812,3.19508633264953,0.705264687593482,1.3564847384839,0.57978255948989,1.63647672354501,0.286804595389004,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0.118306800039844,0,0.723033089650446,0.220587945464788,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.768251997860379,0,0.703702806881416,0.648119116109707,0.325808305310325,0,0,0.463721619900307,0,0,0.462985512576611,0,0,0,0,0,0.445893486866185,0,1.00789276919316,0.708875486211932,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0.380987365753014,0,0,0,0.822619941626588,0.901029173531752,0.857479297891735,0.224262168690721,0.43596006883328,0.1466765716419,0.517086863031111,0,0.845302752556,1.06375246633948,2.08014873822732,0.514414748524284,0,0,1.14382394926518,0,0.823240336780769,0,1.06617584622764,0.791951872933429,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,3.49309748335652,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,0.271265023699736,4.78332981520856,2.14114786556594,2.52323864054295,1.40569697991256,0.300946099727719,0,0,0,0,1.73767228936166,0,0,0,0,0,0.303127571446259,0,0.30239029332968,1.73675465473144,1.84154367945675,1.12264037773229,0.768834895534206,2.04682899626681,1.28683136914886,0,1.85051632563187,0.710246901252508,1.56041596426237,1.55776328755086,0.232420756919918,0,0.40101294060657,0.828728900423067,0.68888668898764,1.82091168006717,0.786746489756545,0,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0.48335359146061,0.154048617114644,0.614014698904518,0.689182862422653,1.28904293841928,0.870100163485371,0.511359764496605,0.445160178233687,0.330569830721956,0,2.4246415373971,0.30347334256665,0.464845549297286,1.5740617341532,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0,1.61885211824983,0.823611089208164,0.706874414074119,0,0,0.421258456238981,0,1.21856744815642,0,0.9554993798559,2.82810863907426,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.7133421029625,0.354761064070598,3.37772216476263,3.29294892959902,0.379473173765715,0,0.288666338176536,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0.432807638929335,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0,0.242721043499027,1.78309414843965,0.284136146806413,0,0.593929361665277,1.22864280839693,0,0.140669416410513,3.7844959707788,0.16480387422676,1.47787785689595,1.59398390600856,0,0.251932747854276,0.920418142519393,0.369254416383208,3.11039587661807,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0,0,0.291604613383254,0.520874984799877,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0.139423744278603,0.538651809526579,3.19037756371603,0,0.359030577639089,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,1.48260564340311,0.370691816839509,0.939797545549098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| ||
|short_description=p@chr4:5821876..5821888,+ | |short_description=p@chr4:5821876..5821888,+ | ||
}} | }} |
Latest revision as of 05:55, 30 July 2015
Short description: | p@chr4:5821876..5821888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:5821876..5821888, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.99e-15 | 23 |
fibroblast | 3.51e-13 | 76 |
preadipocyte | 2.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.30e-10 | 41 |
integument | 2.08e-09 | 46 |
integumental system | 2.08e-09 | 46 |
cavity lining | 2.51e-07 | 12 |
serous membrane | 2.51e-07 | 12 |
body cavity or lining | 6.32e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-10 | 14 |
musculoskeletal system disease | 8.36e-09 | 5 |
myotonic disease | 8.36e-09 | 5 |
muscle tissue disease | 8.36e-09 | 5 |
myopathy | 8.36e-09 | 5 |
muscular disease | 8.36e-09 | 5 |
myotonic dystrophy | 8.36e-09 | 5 |