FFCP PHASE1:Hg19::chr4:66465165..66465176,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:66465165..66465176,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr4:66465165..66465176,- | |description=CAGE_peak_at_chr4:66465165..66465176,- | ||
|id=chr4:66465165..66465176,- | |id=chr4:66465165..66465176,- | ||
|ontology_enrichment_celltype=CL:0000138;1.22e-09;6!CL:0002569;1.44e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |ontology_enrichment_celltype=CL:1000306!2.45e-08!4;CL:0002547!2.45e-08!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0002569;1.44e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | ||
|ontology_enrichment_disease=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0002569,1.57e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0002114;9.45e-18;2!UBERON:0002108;3.26e-11;4!UBERON:0003422;1.44e-09;6!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3350!4.16e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003296!1.16e-14!4;UBERON:0010133!1.16e-14!4;UBERON:0002780!9.08e-13!41;UBERON:0001890!9.08e-13!41;UBERON:0006240!9.08e-13!41;UBERON:0001049!1.23e-12!57;UBERON:0005068!1.23e-12!57;UBERON:0006241!1.23e-12!57;UBERON:0007135!1.23e-12!57;UBERON:0000955!2.00e-12!69;UBERON:0006238!2.00e-12!69;UBERON:0003080!2.14e-12!42;UBERON:0002616!4.40e-12!59;UBERON:0002619!2.03e-10!22;UBERON:0002346!6.91e-10!90;UBERON:0001017!8.25e-10!82;UBERON:0003075!2.37e-09!86;UBERON:0007284!2.37e-09!86;UBERON:0005743!3.64e-09!86;UBERON:0000956!5.02e-09!25;UBERON:0000203!5.02e-09!25;UBERON:0001950!5.19e-09!20;UBERON:0003056!6.57e-09!61;UBERON:0001894!2.22e-08!7;UBERON:0006222!2.22e-08!7;UBERON:0001905!2.36e-08!2;UBERON:0002757!2.36e-08!2;UBERON:0010134!2.36e-08!2;UBERON:0002784!2.36e-08!2;UBERON:0005408!2.36e-08!2;UBERON:0001899!2.36e-08!2;UBERON:0000415!2.45e-08!4;UBERON:0007240!2.45e-08!4;UBERON:0005742!2.45e-08!4;UBERON:0005734!2.45e-08!4;UBERON:0004664!2.45e-08!4;UBERON:0004663!2.45e-08!4;UBERON:0001869!2.59e-08!32;UBERON:0002791!5.17e-08!33;UBERON:0000007!5.31e-08!2;UBERON:0000073!6.44e-08!94;UBERON:0001016!6.44e-08!94;UBERON:0002020!9.92e-08!34;UBERON:0003528!9.92e-08!34;UBERON:0001893!9.92e-08!34;UBERON:0000033!1.19e-07!123;UBERON:0000153!4.44e-07!129;UBERON:0007811!4.44e-07!129;UBERON:0001872!8.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0002114;9.45e-18;2!UBERON:0002108;3.26e-11;4!UBERON:0003422;1.44e-09;6!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0002114,9.46e-18,2;UBERON:0002108,3.26e-11,4;UBERON:0003422,1.57e-09,6 | |||
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| ||
|short_description=p@chr4:66465165..66465176,- | |short_description=p@chr4:66465165..66465176,- | ||
}} | }} |
Latest revision as of 06:03, 30 July 2015
Short description: | p@chr4:66465165..66465176, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:66465165..66465176, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
mesenchymal stem cell of umbilical cord | 1.57e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
duodenum | 9.46e-18 | 2 |
small intestine | 3.26e-11 | 4 |
mesenchyme of umbilical cord | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |