FFCP PHASE1:Hg19::chr4:70591874..70591902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:70591874..70591902,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr4:70591874..70591902,- | |description=CAGE_peak_at_chr4:70591874..70591902,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002551!2.57e-07!6;CL:0000775!9.72e-07!3 | |ontology_enrichment_celltype=CL:0002551!2.57e-07!6;CL:0000775!9.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.23e-23;3!CL:1000306;1.47e-16;4!CL:0002547;1.47e-16;4!CL:0000094;3.12e-15;8!CL:0000081;4.06e-11;11!CL:0002557;2.46e-08;1!CL:1000413;1.04e-07;9 | |ontology_enrichment_celltype_v019=CL:0000775;3.23e-23;3!CL:1000306;1.47e-16;4!CL:0002547;1.47e-16;4!CL:0000094;3.12e-15;8!CL:0000081;4.06e-11;11!CL:0002557;2.46e-08;1!CL:1000413;1.04e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.36e-23,3;CL:1000306,1.19e-16,4;CL:0002547,1.19e-16,4;CL:0000094,3.07e-15,8;CL:0000081,4.01e-11,11;CL:0002557,2.29e-08,1;CL:1000413,7.95e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.88e-10!110;UBERON:0001009!6.63e-10!113 | |ontology_enrichment_uberon=UBERON:0004535!1.88e-10!110;UBERON:0001009!6.63e-10!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.47e-16;4!UBERON:0000415;1.47e-16;4!UBERON:0007240;1.47e-16;4!UBERON:0005742;1.47e-16;4!UBERON:0005734;1.47e-16;4!UBERON:0004664;1.47e-16;4!UBERON:0004663;1.47e-16;4!UBERON:0002108;4.28e-14;4!UBERON:0000160;5.69e-10;17!UBERON:0001637;2.16e-08;42!UBERON:0003509;2.16e-08;42!UBERON:0004572;2.16e-08;42!UBERON:0005409;9.36e-08;22!UBERON:0000178;9.94e-08;15!UBERON:0000179;9.94e-08;15!UBERON:0000463;9.94e-08;15!UBERON:0003915;1.04e-07;9!UBERON:0004700;1.04e-07;9!UBERON:0001917;1.04e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.47e-16;4!UBERON:0000415;1.47e-16;4!UBERON:0007240;1.47e-16;4!UBERON:0005742;1.47e-16;4!UBERON:0005734;1.47e-16;4!UBERON:0004664;1.47e-16;4!UBERON:0004663;1.47e-16;4!UBERON:0002108;4.28e-14;4!UBERON:0000160;5.69e-10;17!UBERON:0001637;2.16e-08;42!UBERON:0003509;2.16e-08;42!UBERON:0004572;2.16e-08;42!UBERON:0005409;9.36e-08;22!UBERON:0000178;9.94e-08;15!UBERON:0000179;9.94e-08;15!UBERON:0000463;9.94e-08;15!UBERON:0003915;1.04e-07;9!UBERON:0004700;1.04e-07;9!UBERON:0001917;1.04e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.19e-16,4;UBERON:0007240,1.19e-16,4;UBERON:0005742,1.19e-16,4;UBERON:0005734,1.19e-16,4;UBERON:0004664,1.19e-16,4;UBERON:0004663,1.19e-16,4;UBERON:0002108,4.48e-14,4;UBERON:0000160,4.70e-10,17;UBERON:0001637,8.95e-10,42;UBERON:0003509,8.95e-10,42;UBERON:0004572,8.95e-10,42;UBERON:0004797,9.56e-10,7;UBERON:0003915,7.95e-08,9;UBERON:0004700,7.95e-08,9;UBERON:0001917,7.95e-08,9;UBERON:0000178,1.09e-07,15;UBERON:0000179,1.09e-07,15;UBERON:0000463,1.09e-07,15;UBERON:0004535,3.36e-07,109;UBERON:0001009,5.96e-07,112;UBERON:0005409,6.89e-07,25 | |||
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| ||
|short_description=p@chr4:70591874..70591902,- | |short_description=p@chr4:70591874..70591902,- | ||
}} | }} |
Latest revision as of 06:14, 30 July 2015
Short description: | p@chr4:70591874..70591902, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:70591874..70591902, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.36e-23 | 3 |
fibroblast of tunica adventitia of artery | 1.19e-16 | 4 |
fibroblast of the aortic adventitia | 1.19e-16 | 4 |
granulocyte | 3.07e-15 | 8 |
blood cell | 4.01e-11 | 11 |
fibroblast of pulmonary artery | 2.29e-08 | 1 |
endothelial cell of artery | 7.95e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.19e-16 | 4 |
tunica adventitia of artery | 1.19e-16 | 4 |
adventitia | 1.19e-16 | 4 |
tunica adventitia of blood vessel | 1.19e-16 | 4 |
aorta tunica adventitia | 1.19e-16 | 4 |
aorta wall | 1.19e-16 | 4 |
small intestine | 4.48e-14 | 4 |
intestine | 4.70e-10 | 17 |
artery | 8.95e-10 | 42 |
arterial blood vessel | 8.95e-10 | 42 |
arterial system | 8.95e-10 | 42 |
blood vessel layer | 9.56e-10 | 7 |
endothelial tube | 7.95e-08 | 9 |
arterial system endothelium | 7.95e-08 | 9 |
endothelium of artery | 7.95e-08 | 9 |
blood | 1.09e-07 | 15 |
haemolymphatic fluid | 1.09e-07 | 15 |
organism substance | 1.09e-07 | 15 |
cardiovascular system | 3.36e-07 | 109 |
circulatory system | 5.96e-07 | 112 |
gastrointestinal system | 6.89e-07 | 25 |